Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1447 ATGTCGAGCTTACTTAATTCTTCTCTGAACGGGTCTGCTTCAAATCTTCCAGATGGTGCTGCTGGGCGCTCCTTTGCTACGTCATTTTCTGGTTCTATTCAGGGATTGCACAACATTCACGGGAGCTATAATGTACCCAATATGCCCAGTTCACTTACATCAAGAAACTCAACGTTAAATAGTGTTCCTTCTGGGGGAGGAGTTCAACAACCTTCAGCAAGCCTTTCAAGTGGAAGATTTGCGTCAAATAATCTACCCGTTGCTCTGTCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAGTAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATCACCAGTTCGATGGGAAACATGGTTGGTGGGGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCTGTTCCTGGCCTTGCTTCTCGTATAAATTTAGGTGGAAATGCTGGCTCTGGTGGTTTAGGCGTGCAAGGACAGAATCGATTGATGAGTGGTGTTCTTTCGCAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCTGGAGGTCCACTTTCACAAAGTCATGTTCAAACAGTAAATAACTTGAACTCTATGGGGATGCTGAATGATGTGAATTCTGGTGACAGTTCACCTTTTGATATCAATGACTTCCCTCAACTGACCACTCATCCTAGTTCTGCTGGTGGGCCTCAAGGACAGTTGGGTGGTCTTGGAGTTAGTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAAGGAAGACTTCCCAGCTTTACCAGGATTCAAAGGTGGTACTGCCGATTTTGCAATGGATATGTACCAGAAAGAACAACTTCATGATAACACTGTGTCAATGATGCAATCTCAGCATTTCTCCATGGGGAGATCTTCTGGTTTCAGTTTGGGGGGATCATATCCGTCACATCGTACACAGCAGCAGCAGCAACAGCAGCATACCCCTTCGGTCAGTGGTAATGGGGTCTCCTTTTCATCTGTAAACAATCAAGATCTTCTCCATTTGCATGGAACAGATATGTTTCCATCTTCACACTCAACTTATCATTCCCAGACCAGTGGACCTCCTGGCATTGGACTAAGGCCTCTAAATTCTCCAAATACTGGTATGGGTTCATATGACCAGCTTATTCAGCAGTATCAACAGCAGCAGAACCAGTCCCAGTTCCGCCTTCAGCAAATGTCAGCTGCAAATCAGTCTTTTAGGGATCAGGGCATGAAATCTATGCAAAGTGTGCAATCTAGTCCAGATCCATTTGGTGCACTTGGCTTGTTCAGTGTAGTCCATATAAGTGATCCTGACCTGAAATATCTTGCTCATGGGATTGATCTCACAACACTTGGTTTGAATTTGAATTCATCAGAAAATCTTTACAAAACTTTTCGATCTCCATGGTCTGATGAACCGGCCAAGGGCGATCCAGAGTTCAGTGTGCTACAATGTTATTATGCTAAACAGCCGCCTGCCCTACATCAAGGTTATTTTTTGAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAGGATGAAGCACAACTATATGCAGCAAATGAACTTTACAAACGAGGTTGGTTTTATCATAAAGAACATCGTTTTTGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTCAAAACAAATACATACGAGAGAGGATCTTACCACTGTTTTGATCCAACTACCTTTGAAACAGTCCGGAAGGATAATTTTGTTCTTCATTATGAGTTGGTGGAAAAGAGACCGTCTTTGCCTCAACCTCAACGTTAA 1839 0.435 MSSLLNSSLNGSASNLPDGAAGRSFATSFSGSIQGLHNIHGSYNVPNMPSSLTSRNSTLNSVPSGGGVQQPSASLSSGRFASNNLPVALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSVPGLASRINLGGNAGSGGLGVQGQNRLMSGVLSQGSPQVISMLGNSYPSAGGPLSQSHVQTVNNLNSMGMLNDVNSGDSSPFDINDFPQLTTHPSSAGGPQGQLGGLGVSPIVQQNQEFSIQKEDFPALPGFKGGTADFAMDMYQKEQLHDNTVSMMQSQHFSMGRSSGFSLGGSYPSHRTQQQQQQQHTPSVSGNGVSFSSVNNQDLLHLHGTDMFPSSHSTYHSQTSGPPGIGLRPLNSPNTGMGSYDQLIQQYQQQQNQSQFRLQQMSAANQSFRDQGMKSMQSVQSSPDPFGALGLFSVVHISDPDLKYLAHGIDLTTLGLNLNSSENLYKTFRSPWSDEPAKGDPEFSVLQCYYAKQPPALHQGYFLKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRFWFIRVPNMEPLVKTNTYERGSYHCFDPTTFETVRKDNFVLHYELVEKRPSLPQPQR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1447 612 MobiDBLite consensus disorder prediction 220 243 - -
Pvu5g1447 612 MobiDBLite consensus disorder prediction 360 378 - -
Pvu5g1447 612 MobiDBLite consensus disorder prediction 308 353 - -
Pvu5g1447 612 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 109 609 - -
Pvu5g1447 612 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 111 - -
Pvu5g1447 612 MobiDBLite consensus disorder prediction 308 378 - -
Pvu5g1447 612 Pfam NOT2 / NOT3 / NOT5 family 479 599 IPR007282 GO:0006355
Pvu5g1447 612 Gene3D - 428 612 IPR038635 -
Pvu5g1447 612 PANTHER CCR4 NOT-RELATED 109 609 IPR040168 GO:0030015
Pvu5g1447 612 PANTHER CCR4 NOT-RELATED 2 111 IPR040168 GO:0030015
Pvu5g1447 612 MobiDBLite consensus disorder prediction 47 79 - -
Pvu5g1447 612 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1447 Pvu-Chr5 36888678 36897015 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1447 K12605 - gmx:100776413 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1447 5 36888678 36897015 Pvu11g0712 11 6047100 6057029 PCT