Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0712 ATGTCGGGGTTACTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGGGCCGGTCGATCTTTTGCGACATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCCGGTTCACTAACGTCGAGAAATTCAACTATAAATAATGTACCATCAGGCGGCGTTCAACAACCCACTGGAAGCCTTTCTAGTGGAAGATTTACATCCAACAATCTACCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCACCAATAGAGGAGGGTTGGGAGTGTCCCCGATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCTGTGGGAAACATGGTTGGTGGAGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCCAGTGGTTTAGGCATGCAAGGACAGAATCGATTAATGAGTGGTGTGCTCCCACAAGGGTCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCCAGCGCTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTAAGTAACTTGAACTCTATGGGAATGTTGAATGATGTGAATACCAATGACAGTTCCCCTTTTGACCTCAACGACTTCCCTCAACTGACAACTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTAAGAAAACAGGGTCTTGGTGTCAGTCCCATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGCGGTAATGCAGATTATGCTATGGATATTCACCAGAAAGAACAACTTCATGACAATGCTGTACCAATGATGCAATCTCAACATTTCTCTATGGGAAGGTCGGCTGGTTTCAGCTTAGGGGGTACATATTCGTCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACCAGGATATTCTCCATTTGCATGGATCAGATATTTTCCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCATCAAAACCAGTCGCAGTTCCGCCTACAAATGTCAGCTGTAAATCAATCTTTTAGGGATCAGGGCATGAAGTCTATTCAAACCACACAACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTTACATCTCTTGCTCTTGGAATTGATCTTACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGTTCTCCATGGTCTGATGAACCTGCTAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTTTGCTAAACAGCCACCCGATCTACATCAAGGATACTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAGTTATATGCCTCCAATGAGCTTTACAACAGAGGTTGGTTTTATCACAAAGAACATCGTTTGTGGTTCATAAGAGTTTCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAACAGACCCCATCTGCCTCAACATTGA 1863 0.431 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDLNDFPQLTTRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDIHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNQDILHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYFAKQPPDLHQGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHKEHRLWFIRVSNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLENRPHLPQH* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0712 620 PANTHER CCR4 NOT-RELATED 2 122 IPR040168 GO:0030015
Pvu11g0712 620 PANTHER CCR4 NOT-RELATED 120 620 IPR040168 GO:0030015
Pvu11g0712 620 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 122 - -
Pvu11g0712 620 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 120 620 - -
Pvu11g0712 620 Pfam NOT2 / NOT3 / NOT5 family 489 611 IPR007282 GO:0006355
Pvu11g0712 620 MobiDBLite consensus disorder prediction 59 90 - -
Pvu11g0712 620 Gene3D - 439 620 IPR038635 -
Pvu11g0712 620 MobiDBLite consensus disorder prediction 332 354 - -
Pvu11g0712 620 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0712 Pvu-Chr11 6047100 6057029 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0712 K12605 - gmx:100807026 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0712 11 6047100 6057029 Pvu11g0712 11 6047100 6057029 ECH
Pvu5g1447 5 36888678 36897015 Pvu11g0712 11 6047100 6057029 PCT