Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1420 ATGAGAAGAAGCAACAACTTGATCGGTTTACTAAACTTCTTCACTTTGGTGTTGTCAGTTCCAATTCTGGGAGGTGGGATATGGCTGAGCACCAGATCCAACGGCACAGAATGCCTGAAGTTCCTTCAGTTGCCATTGATCATCATAGCAGTGATCATGATGGTGACTGCCTTAGCTGGTTTAATCGGGGCGTGTTACCGGAACACGTTACTGATGGCCCTATACCTGCTTGCCATGATCTTCATAATGCTGGTGTTCCTCGGATTCATCATCTTCGCCTACGCTGCGACGGCTAAGGGTTCAGGGAAGGTGACAGAGAACCGCGCTTACTTGGAGTATTACCTAGAGGATTACCAAGGTTGGTTGAAGGAACGCGTGGCAAGTGATGAATACTGGACAAAAATAAGCTCTTGCGTTCGGGAATCTAAGCTTTGTGGCAAACTTGGTAGAACCATTCATGGCGTCCCTGAAAATGCTGATACCTTCTACTTAATAAATCTCTCACCTATTCAGTCTGGATGCTGCAAGCCCCCAACAGAGTGTGGTTTCAAATATGAGAACGAGACAGTGTGGAGATCAGAAGAAGGAGTTGTGGGAAGCAACACAGACTGCAGTAGGTGGAGCAATGACCAAAACTTGCTTTGCTATGAATGTGACTCTTGCAAGGCTGGTGTGCTGGCTACACTAAAAAAAAGTTGGAGGAAGGTCTCTATGATCAATATTGTTGTCTTAGTTGTTCTTTTCCTTGTTAACTTAGTTGCTTATGCAGCCTATAAGAACAACCTCAAGATAGATAACTGTCAACCCTGCGGTGAAACAAAGATCACAAAGTTACGACCAACCTAG 846 0.4504 MRRSNNLIGLLNFFTLVLSVPILGGGIWLSTRSNGTECLKFLQLPLIIIAVIMMVTALAGLIGACYRNTLLMALYLLAMIFIMLVFLGFIIFAYAATAKGSGKVTENRAYLEYYLEDYQGWLKERVASDEYWTKISSCVRESKLCGKLGRTIHGVPENADTFYLINLSPIQSGCCKPPTECGFKYENETVWRSEEGVVGSNTDCSRWSNDQNLLCYECDSCKAGVLATLKKSWRKVSMINIVVLVVLFLVNLVAYAAYKNNLKIDNCQPCGETKITKLRPT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1420 281 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Pvu5g1420 281 PANTHER TETRASPANIN-3-LIKE 1 277 - -
Pvu5g1420 281 PRINTS Transmembrane four family signature 6 29 - -
Pvu5g1420 281 PRINTS Transmembrane four family signature 39 65 - -
Pvu5g1420 281 PRINTS Transmembrane four family signature 66 94 - -
Pvu5g1420 281 PANTHER TETRASPANIN-8-RELATED 1 277 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1420 Pvu-Chr5 36577060 36581354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1420 1 278 Miscellaneous Gene Families AT5G60220 59.353 4.33e-113 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1420 - - gmx:100820399 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1420 5 36577060 36581354 Pvu5g1420 5 36577060 36581354 ECH
Pvu5g1420 5 36577060 36581354 Pvu11g0740 11 6469131 6473221 PCT