Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0740 ATGAGAACAAGCAACCACCTGATCGGTGTGCTAAACTTCCTAACGTTCCTGTTGTCGGTTCCGATCCTAGGTGGTGGGATATGGCTGAGCAGCAGAGCGAACAACACGGACTGTCTGAAGTTCCTTCAGTGGCCGTTGATCATAATCGGAGTGAGCATCATGGTGGTGTCGCTGGCGGGTTTCGCCGGCGCCTGTTACCGGAACACGTTCCTGATGCGGCTGTACCTGGTGGTGATGTTCGCCGTGATCGCGGTGCTGATCGGGTTCATCATATTCGCGTACGTGGTGACGGACAAAGGGTCGGGTCGGAGGGTGATGAACCGGGCGTATTTGGAGTACAGCTTGGAGGACTATTCGGGGTGGTTGGAAGAGCGCGTGGCGAGTGATAGCTACTGGGGGAAGATAGGGTCATGCATTAGGGATTCCAAAGTGTGTGCGAAGATGGGAAGAACCATTAATGAAGTTCCTGAAACTGCTGAAATGTTCTACCTCAGACACCTCACACCTATTCAGTCTGGTTGCTGCAAGCCCCCCACAGAATGTGGCTATGTCTATCAGAATGAGACTGTGTGGAACCTAGGATCAGGATTGATGGGAGCCAATGCAGATTGCACTAGGTGGAGCAATGACCAAGAACTGCTTTGCTATGCCTGTGATTCCTGCAAGGCTGGTGTGCTGGCAAGTTTGAAGAAGAGTTGGAGGAAGGTTTCAGTGATCAACATTGTTGTTATGATCCTCCTTGTGATTGTTTACATAGTTGCTTATGCAGCATATAGGAACAACAAGAGGATGGATAATGATGAACCCTATGGTGAAGCCAGGATGACAAAGGCACAACCTAGTGCCTTTCATCTTTAG 858 0.5023 MRTSNHLIGVLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFAVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYSLEDYSGWLEERVASDSYWGKIGSCIRDSKVCAKMGRTINEVPETAEMFYLRHLTPIQSGCCKPPTECGYVYQNETVWNLGSGLMGANADCTRWSNDQELLCYACDSCKAGVLASLKKSWRKVSVINIVVMILLVIVYIVAYAAYRNNKRMDNDEPYGEARMTKAQPSAFHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0740 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Pvu11g0740 285 PRINTS Transmembrane four family signature 6 29 - -
Pvu11g0740 285 PRINTS Transmembrane four family signature 39 65 - -
Pvu11g0740 285 PRINTS Transmembrane four family signature 66 94 - -
Pvu11g0740 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Pvu11g0740 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0740 Pvu-Chr11 6469131 6473221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0740 1 277 Miscellaneous Gene Families AT5G60220 72.563 8.75e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0740 - - gmx:100798336 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1420 5 36577060 36581354 Pvu11g0740 11 6469131 6473221 PCT