Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1327 ATGGCTTCGGCGCGATTGGATCTGGACGGAAATCTCATAAAACCAATCACCATCTGCATGATTGGTGCAGGTGGCTTCATCGGGTCCCACCTCTGCGAGAAGCTCATGTCTGAAACCCCTCACAAGGTTTTTGCCTTGGATGTTTACAACGACAAGATCAAACACCTTCTCGAACCCGACACGCTCCCTTGGGCTGGTCGCATCCAATTCCACCGCCTCAACATCAAGCACGATTCTCGACTTGAGGGCCTCATCAAGACTGCAGATCTGACCATTAATCTGGCTGCCATATGCACTCCCGCGGATTACAACACGCGCCCTCTCGACACCATTTACAGCAACTTCATCGACGCGCTTCCTGTGGTTAAGTACTGTTCGGAAAACAACAAGCGTCTCATTCACTTCTCTACCTGTGAAGTCTATGGGAAAACGATTGGAAGCTTCCTCCCCAAAGATAGTGCACTTCGTCAGGATCCTGCATACTACGTACTTAAGGAGGATGAGTCTCCTTGTATTTTTGGTTCGATTGAAAAGCAGAGATGGTCATATGCCTGTGCTAAGCAGTTGATTGAGAGGCTTGTCTATGCTGAGGGCGCTGAAAATGGTTTGGAATTCACAATTGTGAGGCCTTTTAATTGGATTGGACCACGAATGGATTTCATACCCGGCATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTGGCATGCTTTAGCAATAATCTCCTCCGAGGTGAGCCCCTTAAGCTTGTGGATGGTGGCCAATCCCAGAGAACCTTTGTGTATATTAAGGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGGCAGGGCCAATGGACATATTTTCAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACTCAGGTTTATTCAAAGGTAAGTGGAGAATCACCTCTGGAAAAACCTACTATTGATGTGAGCTCCAAAGAATTTTATGGCGAGGGATATGATGATAGCGACAAAAGAATACCTGACATGACCATAATTAATAGGCAACTTGGCTGGAATCCTGAGACCTCACTTTGGGACCTGCTTGAGTCAACTCTCACCTATCAGCACAGAACTTATGCTGAAGCCATCAAGAAAGTCATTGCAAAGCCTGTGGCAAGTTAA 1164 0.4648 MASARLDLDGNLIKPITICMIGAGGFIGSHLCEKLMSETPHKVFALDVYNDKIKHLLEPDTLPWAGRIQFHRLNIKHDSRLEGLIKTADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSALRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPGRANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSGESPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPETSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1327 387 PANTHER - 4 386 - -
Pvu5g1327 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 4 386 - -
Pvu5g1327 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Pvu5g1327 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
Pvu5g1327 387 Gene3D - 16 378 - -
Pvu5g1327 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1327 Pvu-Chr5 35309354 35312160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1327 16 382 Miscellaneous Gene Families AT1G02000 20.823 3.25e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1327 K12449 - gmx:100792879 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1327 5 35309354 35312160 Pvu5g1327 5 35309354 35312160 ECH
Pvu5g1327 5 35309354 35312160 Pvu11g0913 11 8691236 8693986 PCT