Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0913 ATGGCGCGAGTGGATCTAGACGGGAACCCCATCAAGCCTCTCACGATCTGCATGATCGGTGCCGGTGGGTTCATCGGCTCGCACCTCTGCGAGAAACTCATGTCCGAAACCCCTCACACGGTTTTCGCCTTGGACGTTTACAATGACAAGATTAAGCATCTTCTCGAACCAGATTCTCTACCTTGGGCTGGTCGCATCACCTTCCACCGCCTCAACATCAAACACGATTCTCGAATTAAGGACTCATCAAGATGGCAGATCTCACCATTAATCTCGCTGCGATTTGCACCCCCGCGGATTACAACACGCGCCCGCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTATTCCTCCTCTTCTGGTTCTGTGAAATACTGTTCCGAGAATAACAAGCGTCTTATCCATTTCTCCACTTGTGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCCAAAGATAGTCCTCTTCGTAAGGATCCGGCTTACTATATTCTTAAAGAAGACGAGTCTCCTTGCATTTTTGGTTCTATTGAAAAGCAGAGGTGGTCTTATGCCTGTGCTAAACAGTTGATTGAGAGGCTGATCTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTTAGGCCTTTTAATTGGATTGGACCAAGAATGGATTTCATTCCTGGCATCGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCTTGCTTTAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTAGACGGTGGACAGTCTCAAAGAACCTTTGTTTACATTAAAGATGCGATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCCAGGGCTAATGGTCATATTTTTAATGTGGGTAACCCAAACAACGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTAAGTGGAGAAAAATCTCCTGAAACACCAACAATTGATGTGAGCTCAAAAGAATTTTATGGCGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAATAAACAGGCAGCTCGGTTGGAATCCTGAGACTTCACTTTGGGACCTGCTCGAATCCACTCTGACCTATCAGCACAGGACATATGCTGAAGCAATCAAGAAAGTAATTGCAAAACCCATTGCTAGTTAA 1179 0.4572 MARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVFALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRIKDSSRWQISPLISLRFAPPRITTRARSTPFTAISSTRSPWYSSSSGSVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYILKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEKSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPETSLWDLLESTLTYQHRTYAEAIKKVIAKPIAS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0913 392 Pfam NAD dependent epimerase/dehydratase family 128 293 IPR001509 -
Pvu11g0913 392 Pfam NAD dependent epimerase/dehydratase family 16 81 IPR001509 -
Pvu11g0913 392 PANTHER - 1 391 - -
Pvu11g0913 392 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 391 - -
Pvu11g0913 392 Gene3D - 14 383 - -
Pvu11g0913 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 375 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0913 Pvu-Chr11 8691236 8693986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0913 K12449 - gmx:102667779 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1327 5 35309354 35312160 Pvu11g0913 11 8691236 8693986 PCT