Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1250 ATGAAACATTCTCCTCAGGGTGAATCCAAAACACACCTCTGCATTGCATATTCACCCTTAGTTACCAACCAACCCACACTCATAGCAACCATGACCAAGGACTGCGGCCACCACCACCACAAGCGGCAGGAGCTCCTCCGCCGTGTATTTGCGGCCATCCTCGGCTTTATCTTCCTCGTCCTCCTAGTAGTCTTCATCATCTGGATCATCCTCCGCCCCACCAAACCCCGTTTCCTCCTCCAAGATGCCACCGTTTACGCATTCAACCTCTCCTCCAGCGGCGCCATCCCCTCCCCCACCGCCCCCACCCCCAACACTCTGACCCTCACCATGCAGGTCACCCTCTCCGCCTTCAACCCCAACCACCGCATCGGGGTCTACTACACCAAACTCGACGCCTACGCCTCCTACCGCGGCCAGCAAGTCTCCCTCGCCACCGCCCTCCCCCCCACCTACCAGGGACACCGCGACACCGCCGTCTGGTCCCCCTTCCTCTACGGCAACGCTGTTCCCGTCTCCCCCTTCATGCTCGAGATTCTCCAGCAGGACAAAACCTCCGGAGGAGTGCTGGTCAACGTCAAAGTCAACGGCAGAGTGAAGTGGAAAGTGGGGACTTGGGTCTCCGGAAGGTACCATATTAACGTGAACTGCCCCGCGTATATCAGACTCGCCGGTGACAGTGATGACGCCATCGGGGTGGCGGCTCCGGCTGTGAAGTTTCAGCTTTTACAAAGTTGCATTGTTGATGTTTAG 753 0.5803 MKHSPQGESKTHLCIAYSPLVTNQPTLIATMTKDCGHHHHKRQELLRRVFAAILGFIFLVLLVVFIIWIILRPTKPRFLLQDATVYAFNLSSSGAIPSPTAPTPNTLTLTMQVTLSAFNPNHRIGVYYTKLDAYASYRGQQVSLATALPPTYQGHRDTAVWSPFLYGNAVPVSPFMLEILQQDKTSGGVLVNVKVNGRVKWKVGTWVSGRYHINVNCPAYIRLAGDSDDAIGVAAPAVKFQLLQSCIVDV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1250 250 PANTHER OS05G0367900 PROTEIN 37 250 IPR044839 GO:0098542
Pvu5g1250 250 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 37 250 - -
Pvu5g1250 250 Pfam Late embryogenesis abundant protein 114 217 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1250 Pvu-Chr5 34382643 34383697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1250 - - pvu:PHAVU_005G120900g 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1250 5 34382643 34383697 Pvu5g1250 5 34382643 34383697 ECH
Pvu5g1250 5 34382643 34383697 Pvu11g1009 11 10185939 10187070 PCT