Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1009 ATGTCCACCAAGGACTGCGGCCACCACCACTCTTCACACCGCCGTCTCCTCCGCCTCATTCTGATCGGCGCCGCCGGTTTCATTCTCCTGGTCCTCTTCGTTGTCTTCCTCATATGGGTCATCCTCCGCCCCACCAAGCCCCGCTTCACGCTCCAAGACGCCACCCTCTTAAACTTCAACCTCTCCTCCCCCATCCCCAACACCCTCTCCCTCACCATGCAGGTCACCCTCTCGGCCCACAACCCCAACGCCCGTATCGGCGTCTACTACCACGCGCTCCGCCTCCACGCCTCCTACCGCAGCCAGCAGATCTCCCTCCCCACCGCCCTCCCCGACACCTACCAGGGCCACCACGACTTCACCGTCTGGTCGCCGTTCCTCTACGGTAACACCGTCCCCGTCGCGCCGTTTGTTCTCGCCTCCCTGCAGCAGGACCAAAGTTCCGGCACCGTTATGGTCAACGTTAAGGTCAACGGGAGGGTCAAGTGGAAGGTCGGAACTTGGGTCTCTGGAAGGTACCACATTAATATTAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGCAATGCCGAAGGAGTGAAGTTCCACCTCTTGCAAAGTTGCAGTGTTGATGTGTAG 624 0.5962 MSTKDCGHHHSSHRRLLRLILIGAAGFILLVLFVVFLIWVILRPTKPRFTLQDATLLNFNLSSPIPNTLSLTMQVTLSAHNPNARIGVYYHALRLHASYRSQQISLPTALPDTYQGHHDFTVWSPFLYGNTVPVAPFVLASLQQDQSSGTVMVNVKVNGRVKWKVGTWVSGRYHININCPAYISFAGDRSNAEGVKFHLLQSCSVDV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1009 207 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Pvu11g1009 207 PANTHER OS05G0367900 PROTEIN 6 207 IPR044839 GO:0098542
Pvu11g1009 207 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1009 Pvu-Chr11 10185939 10187070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1009 9 179 EF-hand Containing Proteins AT5G21130 21.637 1.16e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1009 - - gmx:100812905 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1250 5 34382643 34383697 Pvu11g1009 11 10185939 10187070 PCT