Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1230 ATGTCAACTTGTACGAACAAGAAAATCCAATTACCTAAGTCTCGGAGAATAGACGAAGAGACTCTTCTGATGCAGAAGCAGGGCATTGTCACCATTTTGGGATCTAACAACGATTCTGCAACTTCTCTTCGACGCACTCTATCCGCAGACATGTCTTCCAAGAAATGGCTTTCTCAAAATGGGTTTTCTCCCAAGAAAAAGATCGCTTCCTCGGAAGAAATCTCTCGCTCGCTTACAGAAGCCACTGCCGCTGACTCATCGTCTTCGTCAGAAGATGACAACAGCGAAGAAATGAAACAAAACCGGTGCCAGATTTGGAAGACAGTTCAAAAGAAGGAGGAGAATGTGGACAAACTGGGAGAGTTTGACGTATGGAGTTCAATTTTGTCGAAGAAAGGAAACGAAGAAAGCTCCAAATTAACAACCCTTCCTTATGTTCATCCACTTGTGAGAAGGTCAAAGAGCTGTCTGAGTGAAAAGAGTCTCCAGATATGCACGGAGAGTCTAGGATCCGAAACTGGTTCAGATGGGTTCTCTTCTTATTCACCGTCTGAGACAGAGGATTCAGAGGAAGAGAAGGAAGAAAAAGAAGAGGAAGAGAGAGAGAAAGTGGAGCTTTCACACGAGGAAGATTTTCAAGTGCAAGAACAAAACCATGCAGTGAAAAAATCTTCTCCTCGTTCTTTTCCTCCGCCACTCCCTTCACTTCACATGCGATCCCACCGTGACAACGGAAGGTTGTTCATAGAAGCTGTGTCTGTTCCTTCTCTGAACCAATTTTCTGCTCAACGAGAAAATGGTCGCCTTGTCCTCAGTTTTGCTGAAATCTCCGAAGAAGAAGCAGAAGAAGAAGAAGAGGAGTTCGAGGAAGGTGATGATGAGGCAGAGGAATTTGAGTGTTGTGTGAAGGAGCAAGAGCATGCACCCATGTTGTTGTCTAGTGGGTTTGGCTTAGCATTAATGATGAACAAACCAAGTGGAGTAGGCGATTCTAACAGAAGTCCAAAATGGTCGGAGAAGTTCAACAATGTGGTCAATTTTAAGGATGTTGATGTGGCACAACATAGTCCTCTGCCACCAAGGCCAAGGGCTCGGATAGTTCCCTCATCTTCGGGTGCTTTCAGTTCTTATGAATACTATTGCAAAACCAAGCCCAACTCAAAAACCATTCCTTCTCCTACCACGATTACCTTACAACACAACAATTTCAAGAGTTGCAAGGATTCTAGGAGGTCTTTTCTGTTCGGGGAACCTTATTGCATTGCTACATAA 1272 0.441 MSTCTNKKIQLPKSRRIDEETLLMQKQGIVTILGSNNDSATSLRRTLSADMSSKKWLSQNGFSPKKKIASSEEISRSLTEATAADSSSSSEDDNSEEMKQNRCQIWKTVQKKEENVDKLGEFDVWSSILSKKGNEESSKLTTLPYVHPLVRRSKSCLSEKSLQICTESLGSETGSDGFSSYSPSETEDSEEEKEEKEEEEREKVELSHEEDFQVQEQNHAVKKSSPRSFPPPLPSLHMRSHRDNGRLFIEAVSVPSLNQFSAQRENGRLVLSFAEISEEEAEEEEEEFEEGDDEAEEFECCVKEQEHAPMLLSSGFGLALMMNKPSGVGDSNRSPKWSEKFNNVVNFKDVDVAQHSPLPPRPRARIVPSSSGAFSSYEYYCKTKPNSKTIPSPTTITLQHNNFKSCKDSRRSFLFGEPYCIAT* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1230 423 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 21 423 IPR021410 -
Pvu5g1230 423 Coils Coil 274 294 - -
Pvu5g1230 423 MobiDBLite consensus disorder prediction 74 89 - -
Pvu5g1230 423 Pfam Fantastic Four meristem regulator 228 273 IPR046431 -
Pvu5g1230 423 MobiDBLite consensus disorder prediction 168 184 - -
Pvu5g1230 423 MobiDBLite consensus disorder prediction 199 217 - -
Pvu5g1230 423 Coils Coil 186 209 - -
Pvu5g1230 423 MobiDBLite consensus disorder prediction 168 240 - -
Pvu5g1230 423 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 21 423 - -
Pvu5g1230 423 MobiDBLite consensus disorder prediction 57 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1230 Pvu-Chr5 34005201 34007086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1230 - - gmx:100790085 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1230 5 34005201 34007086 Pvu5g1230 5 34005201 34007086 ECH
Pvu5g1230 5 34005201 34007086 Pvu11g1025 11 10709766 10712263 PCT