Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1025 ATGTCAGCACCTTCAATTGTCATGACCAACACCACCAACAACAACCTCTTATCTTCTTCTTCTTCCTCTGCGAAGATAGAAGAAGAGACCATGATGCAGAAGCAGGGCATCATCACCATTTTGGACTCAAACACTAACATAAACACTGTTTCTTCTGCTTCTTCTCTGCGAAGAGCTCTCTCGGCAGACATGTCCTCAAAGAACTGGCTCTCTCAAACCATTGCTACTTCCGAAGAACTCGTGCATGCCAAAACCATTGGTGACTGGGAAGATGAAGAGAGCAGTAACAAGGAGCTTGAAGATGAAGCTGAAAGAGAGAGGCTCGAGATTTGGAGTTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGGCCATTTGATACGTGGAGTTCAATCATATCCCTGAAAGGAAAAGATGAAATCTCGAAATCTCTTCCTGTGTCACCTTATGTTCACCCTCTTGTGAAAAGATCCAAGAGTTGTTTGAATGAGAAGAGCCTCCAAATCTGCACAGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGTTGTTGGTCTCTTCTTACTCTTCTTCTGAGACAGGGGATGCAGAGGAAGAAGAGAAAGTTGCAGAACCAACACACCAAGAAGAAGAAGAGTTGAGCAATTATGCTTCAGTGGTGGCTACAAAGAAGTCCTCGTCACCAACACGTGCTTTCCCTCCACCACTCCATTCACTCTCTCATCAACAAGCTGGTCCTTCACTTCACATGCGTTCACGCCGAGACAATGGAAGGTTGGTTCTAGAAGCTGTTTCTGTCCCTTCTCACAACAATTTCAGCATTCAGCGCCAAGGTGGTCGCCTTGTCCTCTCTTTCTCCAATCACCAAGAGGAGGAGGAAGAAGAAGAAGAAGAAGAGAATGATGGTTGTGTGGAGCAAGAATACTTAGGAGGGTTGGAATTTGGGGAAGATGAGGCAGAAGAGGAAGAAGAATACGGTTTTGGGAGGAAACCACGAGTATCTTCCACTGGAGTGAATTCTGGCTTCATGGAATATGAGAGAGTGATGGAGAAAGGACCCTTATTGTCCAGTGGGGTGACAAGTAGTGTTCATGGGTTGGCTTTGATGATGAATAAAAAGAATAAGCCAATCGGGGTAGTGAATAGGAATCCAAAGTGGGCGGAGAAGTTCAATGAGATGACCAAATTTGATGATGTTAATGGGGCACAATCACTGCCTCCCAGGCCAAGGGTGGCAAGGTTGATTCCATCAGCACCAGCTGTGGCTGCAGCTGCAGCATCTTTCAATTTCAATGCTTATGAGTACTATTGGAGGACCAACTCTGCTTCATCAAAAGGTACTAGTGTGAAACTTAACCCACTTGACCAAAACAAAAAACATCATCACAATCATCAAGAGAACATGAAGAGCAAGGTGGTTGTCTCCGGGGAGATGAACAAGGTGGTCCCAAGGGAGCAACAACAGTTGGTGGTTCTAAGAGGGAAGAATGGTGATTACTTGGTTCAGAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTGTTGCATTGCCACCTCTTGA 1584 0.4564 MSAPSIVMTNTTNNNLLSSSSSSAKIEEETMMQKQGIITILDSNTNINTVSSASSLRRALSADMSSKNWLSQTIATSEELVHAKTIGDWEDEESSNKELEDEAERERLEIWSSIQRNKKEEQEKSGPFDTWSSIISLKGKDEISKSLPVSPYVHPLVKRSKSCLNEKSLQICTESLGSETGSDGLLVSSYSSSETGDAEEEEKVAEPTHQEEEELSNYASVVATKKSSSPTRAFPPPLHSLSHQQAGPSLHMRSRRDNGRLVLEAVSVPSHNNFSIQRQGGRLVLSFSNHQEEEEEEEEEENDGCVEQEYLGGLEFGEDEAEEEEEYGFGRKPRVSSTGVNSGFMEYERVMEKGPLLSSGVTSSVHGLALMMNKKNKPIGVVNRNPKWAEKFNEMTKFDDVNGAQSLPPRPRVARLIPSAPAVAAAAASFNFNAYEYYWRTNSASSKGTSVKLNPLDQNKKHHHNHQENMKSKVVVSGEMNKVVPREQQQLVVLRGKNGDYLVQNLKSCKDSRRSFLFWEPCCIATS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1025 527 Coils Coil 89 109 - -
Pvu11g1025 527 Pfam Fantastic Four meristem regulator 233 287 IPR046431 -
Pvu11g1025 527 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 29 526 - -
Pvu11g1025 527 MobiDBLite consensus disorder prediction 214 235 - -
Pvu11g1025 527 MobiDBLite consensus disorder prediction 182 252 - -
Pvu11g1025 527 MobiDBLite consensus disorder prediction 196 213 - -
Pvu11g1025 527 MobiDBLite consensus disorder prediction 86 105 - -
Pvu11g1025 527 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 29 526 IPR021410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1025 Pvu-Chr11 10709766 10712263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1025 - - vra:106776294 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1230 5 34005201 34007086 Pvu11g1025 11 10709766 10712263 PCT