Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1210 ATGGCGGAAGCCTTAATCTCAAGTCCAACGATGGTCCACAAAACGAGGGTTCCCATGTCCGCTCGTATGCAGTCTCCCACGAGTGCCTTCTTCGTGGGCTCCAACGACGACCAGCTCGAACGAGCCCAGGCTCGTGCAGCCCGCGCCGCCGCCATCCGCCACCACAAGTCCCTTGCCGTCAACTTCCACTCGCACCCTCCCAAGTCTATTCCCTGTCTCAACAAGCACCAGATTCTCGAGTTGTTCCACAACTGCATAAAGCTCGCTTCCGAAAATAAAATCAATCAGAAAAACACGTGGGAGTTGGATTTGATCGATCACCTCACCGATATTATTAGGGTTGAAGAAGGGAATCCAGTGGAGACTAATTTTCAAATAGCAAGCTGTACTCTTGAAGCTGGAGTCAGAATATATTCCTTAAGGGTGGATTCGGTGCATTCCAATGCATATAAAGTCCTTGCTGGAATGAATAGAGCAGGCCAAGATACCGAGGAAGACGCTACTTTAGGGAGTGTTAATGCTGGAAATGGACAGGCAAGCAGGAAGGAAGTTGACAAAAAGTTGTCTTTTTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGACGTTGCATTTGCAGTGGATCCACTCTATCACCAGACATCAGCAAAATTTGATGAAGGTGGAGCCAAAGGCCTTTTGATGAATAATCTTGGCGTATATGGTAAATGTAGGGTGCTCTTTGACTCACTTGAAGTGCCCGCGAAGTGCATAATCAGTCAAAATGATCATGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGACTGTGTTGAACAGATGATACTGAATATGCATACGAAAGATGTAATCTCTCCAACTCTCCGGATGATAGTAAATCAATTTGATGAAAATAATAGAAGGCCTTTTGATTTTCAATCTTCTGGCGAGAAATCAGCTGAAGAGTTTGATGCAGCTATTGATTGTAAAGTTGTCAATGGAAAAGAAGAATATGAGAACTGCTCCTCTTGGAGTTATGGACACGATACCCAAACATTTGCTGCTGAAGGGGGCTTTAGTGACGCAGACCCTAGTTTTCCAAGTTACCATGAGGAAAAAGAACCTTTTAATTCCCAAGACCCTGATATGGATGACATATTTGACAATGTCGATGGATGTTTATTTTTGAGTCTGGGTTTTAGGTCAAAGAAAAAATCATGGGCAGGTCCTGATCATTGGAAATATAAAAAAATTCAAGGCTCAAAGTCAAAGGTTCATTCTACTTATTGTACTTCCGAGGATGAGTTGATGATCCAGAAAACCAGGCAGCCAAGGACAAAGAGACAGTGTATTGGGAGGAGAGCGAGAATGGTACCAGATGTCTCAGAAGAACAATGCTATAATAACGAATCATTCCCTTCCTGGGATGATGGAAGTGTTTGTGATGATGTTACTGATGTATATAATGACATGGGTGACTCTAGCACACTTATTTCTCGGCCTCGTCAAATCAATAAAATTGAAGTCCAGTATGACAAAACATCCAAACAAGTCAATGTGCAGGCTCTGAAAATAACACTCTGGGACCATATTCAAGAATCTATTCAACTTCCGTTTCAGGGTCAGAAAGAAATGGTATCTTTCAGGCATATATTGACAAACTTTCCAAGTAAATGCAATGCTGCTGCAACTATTAGTGACATATCTCCACATCTGTGTTTTATATGCCTATTACATTTGGCTAATGAGAAGGGGTTGAGCATCCAAAGTTGCCCCAACTTGGATGATCTTGGCATATGCTTACTTGATGGTGCCACTAACACCAGAACAGTTTAG 1833 0.4217 MAEALISSPTMVHKTRVPMSARMQSPTSAFFVGSNDDQLERAQARAARAAAIRHHKSLAVNFHSHPPKSIPCLNKHQILELFHNCIKLASENKINQKNTWELDLIDHLTDIIRVEEGNPVETNFQIASCTLEAGVRIYSLRVDSVHSNAYKVLAGMNRAGQDTEEDATLGSVNAGNGQASRKEVDKKLSFLSTLESSFEVLNVKKFDVAFAVDPLYHQTSAKFDEGGAKGLLMNNLGVYGKCRVLFDSLEVPAKCIISQNDHDISDTIDLSFARDCVEQMILNMHTKDVISPTLRMIVNQFDENNRRPFDFQSSGEKSAEEFDAAIDCKVVNGKEEYENCSSWSYGHDTQTFAAEGGFSDADPSFPSYHEEKEPFNSQDPDMDDIFDNVDGCLFLSLGFRSKKKSWAGPDHWKYKKIQGSKSKVHSTYCTSEDELMIQKTRQPRTKRQCIGRRARMVPDVSEEQCYNNESFPSWDDGSVCDDVTDVYNDMGDSSTLISRPRQINKIEVQYDKTSKQVNVQALKITLWDHIQESIQLPFQGQKEMVSFRHILTNFPSKCNAAATISDISPHLCFICLLHLANEKGLSIQSCPNLDDLGICLLDGATNTRTV* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1210 610 PIRSF Condensin_H 457 602 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 PIRSF Condensin_H 268 451 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 PIRSF Condensin_H 6 275 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 Pfam Condensin complex subunit 2 24 447 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 Pfam Condensin complex subunit 2 488 598 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 448 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 PANTHER CONDENSIN COMPLEX SUBUNIT 2 448 604 IPR022816 GO:0000796|GO:0007076
Pvu5g1210 610 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 448 - -
Pvu5g1210 610 PANTHER CONDENSIN COMPLEX SUBUNIT 2 448 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1210 Pvu-Chr5 33763574 33767538 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1210 K06676 - gmx:100777082 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1210 5 33763574 33767538 Pvu5g1210 5 33763574 33767538 ECH
Pvu5g1210 5 33763574 33767538 Pvu11g1043 11 11000891 11005971 PCT