Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1043 ATGGCGGAAACGTTAAGCCCAAACCCCTTGGTGGGTCAGAAGCAGAGGTTCCGTATCCAGTCCCCCACCGCTAACTTCTTCTTGGGCTCCAACAATGACCAGCTCGAGCGCGCCGAGGCCCGAGCCGCTCGGGCCGCCGCCATCCGCCGAAAGAGCCTCGGGTTCAGCCAACCTCTTCAGGCCAACTCGGATCCCTGCCTCAACAAACAGCAGATCCTCGATTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAATACGTGGGAGTTGAACCTGATTGATCACCTTACTGATATCATCAAGGGCGAGCAAGAAGATGACGCGGAGACTAATTTTCAAAAAGCAAGCTGCACACTTGAGGCTGGAGTCAAAATTTATTCATTAAGAGTAGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCCGAGCAAGACACTAGCCTGGATGGTGTTAATATTGAAAGTGGACAAGAAGAAAACAGGAAAGAAACAAGCAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTCGAGGCACTTAATGTTAAGAAGTTTGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTCGGTGTATATGGCGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCCGCGAAGTGTATGGCAAAACAAAATCAATCTGATATTTCAGATACTATTGATCTTTCTTTTGTCAAAGATTGTATGGAGCAGATGGTGTTGGACATGCGTGTTAAGGATGAAATTTCTCCAACTCTGAGGACTATAGTAAGCCTATTTGATGAAAGTAACAGAAGGCCCACTGATGTTCAACATCACGACAAGAATTCAGCTGAAGATCTTGACGCCTCTTCTTTTAATAATGAAAGTGGTTTTGACAGAGAAGAATATGGGAACAGCATGACCTGGAGTGACGATCACGATGACCAAACGGTTGTTGCCGATGTAGGCTATAATGATGATGATCCAAGTTTTCCCAATTACCCTCAGGACAATGATGAGCCATTTCCGTCCCCAGACGCTGATATGGATGACAGATTTGACAATGTCGACGGATATTTATTTTTGAGTCTGGGCTTTAATTCAAAACAAAACGCCTGGGCCGGCCCTGATCATTGGAAGTATCGAAAATCCAAAGCCTCAGAGGTTCATCCTACTTCCGAAGATGGGTCGATCATAAAAAGTAGGCTGCCAAAGAGTAAGAGACAGGCTGAAGTTGAATTAAATTTCACAAATTCTCTTGAGAAAGAAATGCTAGATATATTTTCTACTCCCAAGAATCCCAAATCATTACTACTCCCCGAAAGCAGATTGCCTTGCAATACAAAACTTCCCGAGGACTGCCACTATCATCCAGAGGATCTTGTCAAGTTATTTCTTCTGTCTAATGTGAAGTGTCTCGGGAGGAGGGCAAACAGGTTCGCAGATGGATCTAGAGAACAATCCAATGAATATGAATCATTCCCTTCGTGGGACAATGGAAGTGTTGGTGGGGATGACTATGGTGACTACGGAGGTGATCTTCATAGTGACATGGAGGACTCCAACACTCTCATTACTCAACCTCGCCAGGTCAATAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTTGATGTTCATGCACTAAAAATTACTATTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTGCAGGGACAAAAAGATACCTTATCTTTCAGGAATATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACCATTAGTGACATCTCTCCTCACTTGTGCTTCATATGTCTATTGCATCTGGCAAACGAGAAAGGATTGAGCATTCAAAACTGCTCCAACTTGGATGATCTTACCATATGCCTTCCACATGTTGCTGACTCTTTAAGGGGAACAGTTTAG 2010 0.4353 MAETLSPNPLVGQKQRFRIQSPTANFFLGSNNDQLERAEARAARAAAIRRKSLGFSQPLQANSDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKGEQEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTSLDGVNIESGQEENRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSLEVPAKCMAKQNQSDISDTIDLSFVKDCMEQMVLDMRVKDEISPTLRTIVSLFDESNRRPTDVQHHDKNSAEDLDASSFNNESGFDREEYGNSMTWSDDHDDQTVVADVGYNDDDPSFPNYPQDNDEPFPSPDADMDDRFDNVDGYLFLSLGFNSKQNAWAGPDHWKYRKSKASEVHPTSEDGSIIKSRLPKSKRQAEVELNFTNSLEKEMLDIFSTPKNPKSLLLPESRLPCNTKLPEDCHYHPEDLVKLFLLSNVKCLGRRANRFADGSREQSNEYESFPSWDNGSVGGDDYGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITIWDHVQESVKLPLQGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNCSNLDDLTICLPHVADSLRGTV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1043 669 MobiDBLite consensus disorder prediction 155 169 - -
Pvu11g1043 669 MobiDBLite consensus disorder prediction 155 184 - -
Pvu11g1043 669 MobiDBLite consensus disorder prediction 301 316 - -
Pvu11g1043 669 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 IPR022816 GO:0000796|GO:0007076
Pvu11g1043 669 MobiDBLite consensus disorder prediction 317 333 - -
Pvu11g1043 669 MobiDBLite consensus disorder prediction 335 350 - -
Pvu11g1043 669 Pfam Condensin complex subunit 2 547 656 IPR022816 GO:0000796|GO:0007076
Pvu11g1043 669 Pfam Condensin complex subunit 2 56 508 IPR022816 GO:0000796|GO:0007076
Pvu11g1043 669 MobiDBLite consensus disorder prediction 300 376 - -
Pvu11g1043 669 PIRSF Condensin_H 1 547 IPR022816 GO:0000796|GO:0007076
Pvu11g1043 669 PIRSF Condensin_H 541 659 IPR022816 GO:0000796|GO:0007076
Pvu11g1043 669 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1043 Pvu-Chr11 11000891 11005971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1043 K06676 - gmx:100799781 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1043 11 11000891 11005971 Pvu11g1043 11 11000891 11005971 ECH
Pvu5g1210 5 33763574 33767538 Pvu11g1043 11 11000891 11005971 PCT