Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1189 ATGGGTTCAATGGAGACGGAACCGCTCTTGGGATTGTTCTCTTCGGTAGAGGAAACTCCTCGCTCAAATTCCAAACATGGCTCCAATGGGGAACTTGAGAGAATTCTCACAGACGACACCCTCCCTTTCCTCCGCCGTGTGGGGGCTGCCTTGTGCGTCGAATTCAGGCTCCTCTTCTTCCTCGCTGCCCCTGCGGTGGTTGTCTACCTCATCAACTACGTCATGTCCATGTCCACGCAAATCTTCTCCGGCCACCTCGGTAACCTTGAACTCGCTGCCTCCGCCCTCGGCAACAACGGCATCCAAGTCTTCGCTTATGGCCTCATGTTGGGAATGGGGAGTGCGGTTGAGACGCTATGCGGACAAGCATACGGTGCGCGGAAGTTCGGGATGCTAGGCGTGTACATGCAGCGCTCAACGGTGCTTCTCTCATTGGCCGGCATCGTTGTGACGGTCATATACGCATTTAGTGAGCGCATTTTACTTTTCCTCGGCCAGTCGGAGGAAATCGCGGCGGCGGCGGCGCTCTTCGTGTACGGTTTGATTCCTCAGATCTTCGCCTACGCGGCGAACTTCCCTATCCAGAAGTTTTTGCAGGCGCAGAGCATAGTGACGCCGAGCGCGTACATCTCAGCGGTGACGCTGGGGGTCCACCTGTTGCTGAGCTGGGTGGCGGTGTACAAGATTGGGATGGGGCTGTTGGGTGCGTCGCTGGTGCTGAGCCTGTCGTGGTGGATCATCGTGATTGCTCAGTACGTGTACATCGTGTATAGCCCGAGGTGCAAGACGACGTGGCAGGGGTTCACGTGGCAGGCATTTTCTGGGTTATCGGCGTTCTTCAAGCTCTCTGCAGCTTCCGCAGTTATGCTGTGTTTGGAGACGTGGTATTTTCAAATTGTCGTGCTGCTCGCTGGCCTGCTTCCTCACCCTGAATTGGCCCTTGATTCCCTTTCTATCTGTACCACAATTTCTGGATGGGTGTTCATGATCTCTGTTGGATTCAACGCCGCCGCAAGTGTGAGGGTGGGCAACGAACTCGGAGCAGGAAATCCAAAATCAGCGTCCTTTTCGGTGGTGGTGGTGACAGCGGTTTCTTTCATGATATCAGTTATTGCAGCAGTGGCGGTTCTTGTATTTAGGGATGTCATTAGCTATGCCTTCACAGAGGGTGAAGTGGTTGCTACTGCAGTTTCAGATCTTTGCCCACTGCTTGCTCTTTCTATTGTCCTCAATGGCATTCAGCCCGTCTTATCCGGGGTGGCTGTTGGATGTGGTTGGCAAGCTTTCGTAGCTTATGTAAACGTAGGTTGTTATTATGGAGTTGGCTTACCACTGGGTTCGCTTCTAGGCTTTTATTTTGACTTCGGTGCCAAGGGAATATGGCTGGGAATGTTAGGTGGCACCGCCATGCAAACTGTTATCCTAATTTGGGTGACATTTAGAACGGACTGGAATAAGGAGGTAGAGGAAGCAGCCAAGAGGTTGAGCATATGGGAGGACAAGAAGGAGCCAGTACTAAACTGA 1524 0.5295 MGSMETEPLLGLFSSVEETPRSNSKHGSNGELERILTDDTLPFLRRVGAALCVEFRLLFFLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAASALGNNGIQVFAYGLMLGMGSAVETLCGQAYGARKFGMLGVYMQRSTVLLSLAGIVVTVIYAFSERILLFLGQSEEIAAAAALFVYGLIPQIFAYAANFPIQKFLQAQSIVTPSAYISAVTLGVHLLLSWVAVYKIGMGLLGASLVLSLSWWIIVIAQYVYIVYSPRCKTTWQGFTWQAFSGLSAFFKLSAASAVMLCLETWYFQIVVLLAGLLPHPELALDSLSICTTISGWVFMISVGFNAAASVRVGNELGAGNPKSASFSVVVVTAVSFMISVIAAVAVLVFRDVISYAFTEGEVVATAVSDLCPLLALSIVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGLPLGSLLGFYFDFGAKGIWLGMLGGTAMQTVILIWVTFRTDWNKEVEEAAKRLSIWEDKKEPVLN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1189 507 PANTHER PROTEIN DETOXIFICATION 40 17 495 - -
Pvu5g1189 507 CDD MATE_eukaryotic 54 490 IPR045069 GO:0042910|GO:1990961
Pvu5g1189 507 Pfam MatE 286 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g1189 507 Pfam MatE 64 224 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g1189 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 495 - -
Pvu5g1189 507 Coils Coil 481 501 - -
Pvu5g1189 507 TIGRFAM matE: MATE efflux family protein 64 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1189 Pvu-Chr5 33257215 33261962 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1189 K03327 - gmx:100795338 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1189 5 33257215 33261962 Pvu5g1189 5 33257215 33261962 ECH
Pvu5g1189 5 33257215 33261962 Pvu11g1073 11 11872156 11878302 PCT