Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1169 ATGAAAACGACACTTCACCGTCTTATCAAAACCAAACCTACTCTGATGAAATTCATTTTGGTCTCGTCTTTATTTTGTGTCATTTCTCTCTGTGTATCAGTGCTACTCCTAGCCAAAACAAAGGTAATCATGAATAGTCTTTATTCACCACAACATGATGTGTCACAGTCTGATCCTACCACTGTTGATCATCTTGTATTTGGAATTGCCTCAACCGGAACTTCATGGCCTTGGAGGAAGCAATACACCAAGCTTTGGTGGAACAGCATACCAAATATAACAATGAGAGGATGTGTTTTCGTAGATGCCCTCCCACATGAAGAAAATGTCAGCAATGATGGTTCTCTTCCTCCTCTTTGTGTCTCTCAAAACACTTCCCAGTTTCTCTACACTTACAAGCATGGTCTACCCTCAGCAATCCGTGTGGCACGAGTTGTGAAAGAGACTGTGGCACTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCAAAATCTGCTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTGGGGTCCAACTCAGAGATTTATGAGGGCACCCAGGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTTCTCCCTAGCGCAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCGCATCTGTATGGAAGTGATTCAAGGGTGTACTCTTGCATAACTGAATTAGGCGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGCGGGGAAATATCTTTGGCCTATTGGCTGCTCATCCGTTAACTTCCTTATTGTCCCTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGTCAAGCATAACATCGCTGCAACATTTATTTGAAGCTGTTCATGTTGATCCCGAGAGGATCCTACAACAAACAGTTTGTTACGAAAAGCAGTTGTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTGAAGTGTTTCAGCACAATATGTTTTTGCCAGAGGTTCTGAGAGTGGGAAGAACATTCAGACAATGGTTGCCAGGAAATGTTTTGAGAGGAATATATAATTTCAATACAAGAGAAGTTCACCCTGATCCGTGTAAAAGAGGCACCATCTTCTATCTAGATAAAGTGTCTTCTGGGAAAGATGGTATCATGAGCAGTTACAAGAGAGATTTTCAAAATTGTTCATACGAGGCATCGATGAGTAAATTGGAAGTGATCAAAGTGGTGACAAATAAGTTAAACGACAACAAACAGACTCCAAGACGGCACTGTTGTGATGTGTTGCCCTCTAATGCTGGTAACTTGATGGAAATTGCAATCAGAGAGTGCAATTTTGAAGAACTAATTTATATGAACTGA 1419 0.413 MKTTLHRLIKTKPTLMKFILVSSLFCVISLCVSVLLLAKTKVIMNSLYSPQHDVSQSDPTTVDHLVFGIASTGTSWPWRKQYTKLWWNSIPNITMRGCVFVDALPHEENVSNDGSLPPLCVSQNTSQFLYTYKHGLPSAIRVARVVKETVALNHSGVRWYVFGDDDTIFFPQNLLKTLSKYDHRLWYYVGSNSEIYEGTQVFGFGMAFGGGGFAISFSLAQVLAKVLDSCIQRYPHLYGSDSRVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPLTSLLSLHHPDHTDPIFPNMSSITSLQHLFEAVHVDPERILQQTVCYEKQLSWTISVSWGYAVEVFQHNMFLPEVLRVGRTFRQWLPGNVLRGIYNFNTREVHPDPCKRGTIFYLDKVSSGKDGIMSSYKRDFQNCSYEASMSKLEVIKVVTNKLNDNKQTPRRHCCDVLPSNAGNLMEIAIRECNFEELIYMN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1169 472 Pfam Protein of unknown function, DUF604 201 445 IPR006740 -
Pvu5g1169 472 Gene3D - 53 334 - -
Pvu5g1169 472 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 470 - -
Pvu5g1169 472 PANTHER FRINGE-RELATED 9 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1169 Pvu-Chr5 32973145 32974869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1169 15 436 Glycosyltransferase AT1G05280 50.698 3.93e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1169 - - gmx:100779943 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1169 5 32973145 32974869 Pvu5g1169 5 32973145 32974869 ECH
Pvu5g1169 5 32973145 32974869 Pvu11g1098 11 12458669 12460939 PCT
Pvu11g1097 11 12456254 12457830 Pvu5g1169 5 32973145 32974869 PCT