Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1098 ATGCAGCTTTTTCACAAACCCACCAAGGCTCAGTCTCTGGTTAATTTCATCATAGTCTCTTCTTCATTCTGCGCCCTTTATCTCATCGTGTCAGTGCTACTATTGGGGACATCCAAGGTAGTACATGTGAACAAGACATCACAAGATGTCTCCATACCTACCACTCTTGATCACCTTGTGTTTGGAATCGCTTCAAGCAAGAGTTCATGGGGCAAGAGGAAGGAATACGTGAAGCTGTGGTGGAACAACATCAACAGCACCACCGGCAAAGCAATGAAGGGGTGCGTGTTCATGGACAGCCTCCCAGATGAAAAACATGTTAGCAATGATACTTCTCTTCCTCCTCTTTGTGTCTCTCAAAACACTTCAAGGTTTCGTTTCACACACAGGGGTGGACTTCGCTCGGCAATACGCGTTGCACGTGTTGTTGCAGAGACCGTGGCAATGAACAATGATTCCGACGTGAGGTGGTTCGTTTTTGGAGACGATGATACAGTTTTCTTCCCGGAGAATGTGGTGAAGACTCTTTCCAAATATGATCACGAGCTTTGGTACTACATTGGTGCACACTCTGAGGTTTATGAGCAGAACAGGGTGTTTGGTTTCGGAATGGCTTTTGGTGGGGCAGGTTTTGCTATCAGCTCCTCTTTGGCAAAGGTTCTGGCCAAGGTTTTTGATTCATGTATACAAAGGTACCCTCATCTCTATGGAAGTGATGGAAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTAGGATTAACACATGAATCCGGTTTTCACCAGGTAGATTTGAAGGGGAATACCTTTGGTTTATTGGCGGCACATCCTTTGACTCCTTTGTTGTCCCTGCATCATCCTGATTACACTGATCCAATCTTTCCAAATATGACAACTATAAAAGCTCTGAAGCATTTATTTGAAGCTGTAAATGTTGATTCCCAGAGGATGCTGCAACAAGTAATTTGCTATGACAAATGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCTGTTCAGGTTTTCCCAAACCATATGCTTTTGCCAGATGTTCTAAAGGTGCAAGAGACATTCAAGCAGTGGAAGAAGGGAAGCATGTTGGCAAAAACATACACTTTCAACACAAGAGAACTTCACAACGACCCTTGTAAAAGATCCACCGTTTTCTTTCTAGACAGTGTCTCATCTGGCAAGGATGGCACCCTAAGCAGTTACAAGAAATCTTTTCAGAATTGCTCAAACGATGCCGTGTCACCGATGAAACTGGAAGTGATCAAAGTGGTCACAGAAAAGTTAGACCTTGACATCAAACAGTTGCTTGCTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACTTCCCAGGACAAAATGGAAATCGCAATCAGGGAATGCAAAGATGAAGAGTTGGTTTACATGAACTAA 1425 0.4414 MQLFHKPTKAQSLVNFIIVSSSFCALYLIVSVLLLGTSKVVHVNKTSQDVSIPTTLDHLVFGIASSKSSWGKRKEYVKLWWNNINSTTGKAMKGCVFMDSLPDEKHVSNDTSLPPLCVSQNTSRFRFTHRGGLRSAIRVARVVAETVAMNNDSDVRWFVFGDDDTVFFPENVVKTLSKYDHELWYYIGAHSEVYEQNRVFGFGMAFGGAGFAISSSLAKVLAKVFDSCIQRYPHLYGSDGRVYSCLAELGVGLTHESGFHQVDLKGNTFGLLAAHPLTPLLSLHHPDYTDPIFPNMTTIKALKHLFEAVNVDSQRMLQQVICYDKWFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWKKGSMLAKTYTFNTRELHNDPCKRSTVFFLDSVSSGKDGTLSSYKKSFQNCSNDAVSPMKLEVIKVVTEKLDLDIKQLLAPRRHCCDVLPSTSQDKMEIAIRECKDEELVYMN* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1098 474 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 472 - -
Pvu11g1098 474 Pfam Protein of unknown function, DUF604 196 447 IPR006740 -
Pvu11g1098 474 PANTHER FRINGE-RELATED 9 472 - -
Pvu11g1098 474 Gene3D - 47 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1098 Pvu-Chr11 12458669 12460939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1098 13 440 Glycosyltransferase AT1G05280 52.860 3.50e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1098 - - gmx:100813816 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1169 5 32973145 32974869 Pvu11g1098 11 12458669 12460939 PCT
Pvu11g1098 11 12458669 12460939 Pvu5g1168 5 32965991 32967521 PCT