Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1156 ATGTCTTCTTCAACTATAATCAGTGCAGTTACAGAACCTGGAGTTTCATCTTTTACCTCGTTTGGTTATCGCAATCGGCCACCATCGATGAATCAACTACGGAACTTATCCTGCAAAACATCAACACCAACCATCATGCAATTATCCATCAACTCTCTCCCTCTCACTCAAAAGGTGCCTAGTCTAATTGATCTTGGGACAAAAAGAATGGAGCAAGTTAAAAGAAGGAGCCAAGAGACATTGTTAAACTCAAGTGATCCAATCAAAACATTGAAGATAATTGACACCATTCAAAGGTTAGGAATTGGACACCATTTTGAAGAAGAGATCAATGTAAAACTTGGAAAGTTAAGGGATTGGGATTTTTCAGAAGACCTCTTTTCCACAACTCTTCAATTTCGACTACTGAGAAATAATGGCTGGCCTACTTCTTCTGATGTTTTCAAGAAATTTTTAGACAAGAGTGGGAATTTCAAGGAATCAATTACCAATGACATTTGGGGAATGTTAAGTATGTATGAGGCATCATATTTAGGTGCAAAAGGTGAAGAAGTGTTAGAAAAGGCCATGGACTTCTCCACGGCTCATCTCCATCAATCACTCCAACATCTAAGTCCTGATGTAGGGAATCTTGTTGCCAGAGCCTTAACACTTCCGAGACACCTAAGGATGAGTAGGTTAGAAGCTAGAAACTACATCAAAGAATATAGCCAAGTAAGTAGCCATATGCCATATCTTTTGGAAATGGCAAAGATAGACTACGCCATGCTTCAGTCAATGCACCAAAAAGAATTTGCAGAAATCTCTAGGTGGTGGAATAAATTGGGACTTGCTGAAAGGCTTGGTTTTGCTAGAGATAAACCAGCAGAGTGCTTTCTATGGACAATGGGAATATTTCCAGAACCGTGTTATTCAAATTGTCGCATTGAGCTTACAAAAACCATTTGTATTTTGCTAGTTATGGATGATATCTTCGACACTTACGGCACATTAGATGAACTCATTCTTTTTACCAAGGCAATCAAAAGGTGGGATCTTGATGCGATGGAACAATTGCCTGAATATATGAAGATAAGCTATTTGGCATTGTATAACACCACCCACGAAATTGCATACAAAATTCAAATGGAGCATGGACAAAATGTTATTTCTAGCTTGAAAAGAACTTGGATAGACATATTTGAAGCTTTTCTAAAAGAAGCCAAATGGTTCAACAACAAATATGTGCCAACTTTTCAAGAATATTTGGATAATGGAGTGATTTCTTCAGGATCATACATGGCCTTGGTGCATGCAACTTTTCTCATTGGGGATGGCCTCTCAAAGGAAACCATTTCCATGATGAACCCATACCCAAGACTTTTCTCATGTTCGGGGGAAATTCTTAGGCTTTGGGACGACTTAGGAACCTCAAAGGAGGAACAAGAAAGAGGAGATAATGCTTGCAGCATACAGTGTCTGATGATAGAAAATAATATTTCAGATGAAAATGTTGCTAGAAAGCATATAAGACGATTTATCCGAAACTTATGGCCAGAGTTAAATAGTCTTGTTTTGACCACAACCTCTTTGCCTTTCTCAATTATGAAGGCTTCTCTTAACATGGCTAGAACTGCTCAAGTAATTTATCAACATGGAGATGATCGAAACACGTTTACAGTTGATGATTATGTTCAAACATTGCTCTTTACACCCTCTGCTAATTATTGA 1710 0.3813 MSSSTIISAVTEPGVSSFTSFGYRNRPPSMNQLRNLSCKTSTPTIMQLSINSLPLTQKVPSLIDLGTKRMEQVKRRSQETLLNSSDPIKTLKIIDTIQRLGIGHHFEEEINVKLGKLRDWDFSEDLFSTTLQFRLLRNNGWPTSSDVFKKFLDKSGNFKESITNDIWGMLSMYEASYLGAKGEEVLEKAMDFSTAHLHQSLQHLSPDVGNLVARALTLPRHLRMSRLEARNYIKEYSQVSSHMPYLLEMAKIDYAMLQSMHQKEFAEISRWWNKLGLAERLGFARDKPAECFLWTMGIFPEPCYSNCRIELTKTICILLVMDDIFDTYGTLDELILFTKAIKRWDLDAMEQLPEYMKISYLALYNTTHEIAYKIQMEHGQNVISSLKRTWIDIFEAFLKEAKWFNNKYVPTFQEYLDNGVISSGSYMALVHATFLIGDGLSKETISMMNPYPRLFSCSGEILRLWDDLGTSKEEQERGDNACSIQCLMIENNISDENVARKHIRRFIRNLWPELNSLVLTTTSLPFSIMKASLNMARTAQVIYQHGDDRNTFTVDDYVQTLLFTPSANY* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1156 569 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 56 565 - -
Pvu5g1156 569 SFLD Isoprenoid Synthase Type I 245 565 - -
Pvu5g1156 569 Pfam Terpene synthase, N-terminal domain 68 215 IPR001906 GO:0010333|GO:0016829
Pvu5g1156 569 Pfam Terpene synthase family, metal binding domain 247 511 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu5g1156 569 Gene3D - 85 242 IPR036965 GO:0010333|GO:0016829
Pvu5g1156 569 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 63 241 IPR008930 -
Pvu5g1156 569 SUPERFAMILY Terpenoid synthases 244 565 IPR008949 -
Pvu5g1156 569 CDD Terpene_cyclase_plant_C1 52 565 IPR044814 GO:0010333|GO:0016102
Pvu5g1156 569 Gene3D Farnesyl Diphosphate Synthase 67 550 IPR008949 -
Pvu5g1156 569 SFLD Terpene Cyclase Like 1 C Terminal Domain 245 565 IPR034741 -
Pvu5g1156 569 PANTHER OS04G0344100 PROTEIN-RELATED 56 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1156 Pvu-Chr5 32773454 32776549 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1156 - - gmx:100807904 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1100 11 12497739 12501127 Pvu5g1156 5 32773454 32776549 PCT