Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1100 ATGACTCTTGTCAATGTCATGTTGCTCAATTCCTCTTCTATTTCATATGTAACTTTTGCCAAACCTCTGAAACCAGTAGCTCCTAATCTTCTCCACCGTAGAATAATCTTCCCTCGATGCAACGCAACCACCACCAACGTTAACGTTTCTGAAAGAAAATCTTCAAACTACCAACCCAACCTCTGGAGTTACGACTTTCTGCAGTCCTTGAAGCATTCATACGCAGATACAAGATATGAGGACAGGGCCCAGCAGCTGCAAGAGGAAGTGAGGAAAATGGTAAAGGATGAAAATTCAGATATGTGGCTCAAACTTGAACTCATTAACGATGTGAAACGCTTGGGCCTGAGTTACCATTATGACAAGGAGATAGGAGAAACCCTTCTTAGGTTTCACTCTTCTGCAAGATTTAGTGCCACAATCGTTCACAGAAGCTTGCATGAAACTGCTTTGTGCTTCAGGCTTATGAGAGAATATGGCTATGATGTCAGTGCAGATACATTTGAGAGGTTCAAGGAGCAGAATGGTGAATCCAAGGCAAGCCTTATGGGTGATGTGAAGGGAGTGTTGAGTCTGTACGAGGCATCGTTTCTTGGCTATGAAGGAGAACAGATTCTGGATGATGCCAGGGCCTTCTCCAGCTTCCATCTTAGGAGTGCACTCAATGAAGGTAGAAGTAATAACATGGTTTTGGAAGAAGTGAATCATGCATTGGAGCTTCCACTGCATCACAGAACCCAAAGGCTGGAAGCCAGATGGTATATTGAACATTATGCTAAAAAAAGAGACTCAAACCGGGTGCTGCTTGAAGCAGCAAAACTTGATTTCAATATTCTGCAGTCAACCCTGCAAAATGATTTCCAAGAAGTCTCAAGGTGGTGGAAGGGAATGGGACTGGCATCAAAGTTAAGCTTCAGCCGAGACAGATTAATGGAATGCTTCTTTTGGGCTGTTGGAATGATCTTCGAGCCTCAGTTGAGTGATCTCCGCAAAGGTTTAACAAAAGTTTCTTGCTTAATAACTACAATCGATGACGTTTATGATGTGTATGGCACCTTAGAGGAATTAGAGCTTTTCACAGCAGCTGTAGAAAGTTGGGATGTTAAAGCCATTCAAGTTCTCCCTGATTACATGAAGATATGTTTTCTGGCACTGTACAACACTGTCAACGAATTTGCCTATGATGCACTTAAAGAACAAGGACAAGATATTCTACCCTATCTCACCAAAGCAGTAT 1237 0.4244 MTLVNVMLLNSSSISYVTFAKPLKPVAPNLLHRRIIFPRCNATTTNVNVSERKSSNYQPNLWSYDFLQSLKHSYADTRYEDRAQQLQEEVRKMVKDENSDMWLKLELINDVKRLGLSYHYDKEIGETLLRFHSSARFSATIVHRSLHETALCFRLMREYGYDVSADTFERFKEQNGESKASLMGDVKGVLSLYEASFLGYEGEQILDDARAFSSFHLRSALNEGRSNNMVLEEVNHALELPLHHRTQRLEARWYIEHYAKKRDSNRVLLEAAKLDFNILQSTLQNDFQEVSRWWKGMGLASKLSFSRDRLMECFFWAVGMIFEPQLSDLRKGLTKVSCLITTIDDVYDVYGTLEELELFTAAVESWDVKAIQVLPDYMKICFLALYNTVNEFAYDALKEQGQDILPYLTKAV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1100 412 CDD Terpene_cyclase_plant_C1 52 412 IPR044814 GO:0010333|GO:0016102
Pvu11g1100 412 Pfam Terpene synthase, N-terminal domain 62 238 IPR001906 GO:0010333|GO:0016829
Pvu11g1100 412 PANTHER OS04G0344100 PROTEIN-RELATED 42 411 - -
Pvu11g1100 412 Pfam Terpene synthase family, metal binding domain 269 411 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu11g1100 412 Gene3D - 99 264 IPR036965 GO:0010333|GO:0016829
Pvu11g1100 412 Coils Coil 76 96 - -
Pvu11g1100 412 PANTHER TERPENE SYNTHASE 12-RELATED 42 411 - -
Pvu11g1100 412 SUPERFAMILY Terpenoid synthases 265 411 IPR008949 -
Pvu11g1100 412 Gene3D Farnesyl Diphosphate Synthase 59 411 IPR008949 -
Pvu11g1100 412 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 58 262 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1100 Pvu-Chr11 12497739 12501127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1100 K12742 K19968 gmx:100782452 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1100 11 12497739 12501127 Pvu11g1100 11 12497739 12501127 ECH
Pvu11g1100 11 12497739 12501127 Pvu5g1156 5 32773454 32776549 PCT