Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1154 ATGTCTTCTTCAACCATAATCACTGCAATTGCAGAACCTGGAGTTTCATCTTTTACCTCGTTTGGTTATCGCAATCGACCACCATTGATGAATAAAGTACGGAACTTATCCTGCAAAACATCAACACCAACCATCATGCAATTATCCATCAACTCTCTCCCTCTCACTCAAAAGATGCCTAGTCAAACTAATCCTATGACGACAAGTTTGGAGCAACTTAAAATAAAAAGTCAAGAGGTATTACTAAACTCAAGTGATTCATTGAGAACATTGAAGTTGATTGACACCATCCAAAGACTAGGAATTGAGCACCATTTCGAGGAAGAGATCAACTTACAACTTGGAAAAGTAAAAGATTGTAACAATGCTAAAGACATCTTTGCAACAGCCCTTCAATTTCGCTTGCTGAGACAAAATGGTTGGTCTACATCTTCAGATGTTTTCAATAAATTTTTGGATAAAAGTGGGAATTTCAAGGAATCGGTCACCAGAGACATTTGGGGCATGTTAAGTTTGTATGAGGCATCATATTTTGGTGCACAAGGTGAAGAAGTGCTACAACGTGCCATGGAGTTCTCAATGGCTCATTTGCACCAGTCACTACCACTCCTAAGTCCTGAAGTAGGAAGAGTAGTTGTTGAAGCCTTAAAACTTCCAAGACATCAAAGAATGAGTAGGTTGGAAGCAAAAAATTACATGGTACAATATAACAAAGAAAGTAGCCAAATTCCTGCTCTTCTACAATTTGCAAGGCTAGAGTATGACACGCTTCAGTTGATTCACCAAAATGAATTAGTAGAGATCTCAAGGTGGTGGAAAAACTTGGGACTTATCGAAAGACTTGGGTTTGGAAGAGATGGACCAAGAGAGTGCTTCCTCTGGATGTTGGGAGTTTTTCCAGAACCATGTTATTCAAATTGTCGTATTGAACTTGCGAAAGCTATTTGCATTTTGCAAGTTCTTGATGATATGTTCGACACTTATGGAACATTAGATGAACTTATTCTTTTCACCGAGGCAGTACAAAGGTGGGATCTTGATGCAATGGAGAAACTACCTGAATATATGAAGATATGTTACATGGCCTTGTATAACATCACTCATGAGATTGCATACAAAATTCAAAAGGATCATGGGCAAACTGTTGTTGCTTGTTTGAAAAAAACATGGATAGACTTACTAGAAGCTTATCTAATAGAAGCAAAATGGTTCAACAACAAATATGTTCCTACTTTTGGGGAATATTTGGATAATGGGGTGATTTCTTCAGGATCATGCTTGGCCTTGGTACATGCAACTTTTCTCATCGGGGATAACCTCTCAAAAGAAACCATTTCCATGATGAGTCCATATCCAAGACTCTTCTCTTGTTCTGGAGAAATTCTTAGGCTTTGGGATGACTTAGGAACCTCCAAGGAGGAACAAAAGAGAGGTGATAATGCTTGTAGCATACAATGTCTCATGAAGGAAAATGATATTTCAGATGAAACTTTTGCTAGAAAGCATATAAGGCAAGTCATTGGAAACTTATGGTCCGAGCTAAATAGTCTAGTTATAGCCACAACCACTCTACCTTTCACAATTAGGAAGGCTTCTCTTAACATGGCTAGAACTTCTCAATTTATTTATCAACATGGCGATGACCAAACCATGCCTACAGTTAATGATCTAGTAAATGTATTACTTTTTACACCTTCTTCCAAATCTAGAGAAGAAAGTGATACCAACTTTGTTGTATGA 1740 0.3787 MSSSTIITAIAEPGVSSFTSFGYRNRPPLMNKVRNLSCKTSTPTIMQLSINSLPLTQKMPSQTNPMTTSLEQLKIKSQEVLLNSSDSLRTLKLIDTIQRLGIEHHFEEEINLQLGKVKDCNNAKDIFATALQFRLLRQNGWSTSSDVFNKFLDKSGNFKESVTRDIWGMLSLYEASYFGAQGEEVLQRAMEFSMAHLHQSLPLLSPEVGRVVVEALKLPRHQRMSRLEAKNYMVQYNKESSQIPALLQFARLEYDTLQLIHQNELVEISRWWKNLGLIERLGFGRDGPRECFLWMLGVFPEPCYSNCRIELAKAICILQVLDDMFDTYGTLDELILFTEAVQRWDLDAMEKLPEYMKICYMALYNITHEIAYKIQKDHGQTVVACLKKTWIDLLEAYLIEAKWFNNKYVPTFGEYLDNGVISSGSCLALVHATFLIGDNLSKETISMMSPYPRLFSCSGEILRLWDDLGTSKEEQKRGDNACSIQCLMKENDISDETFARKHIRQVIGNLWSELNSLVIATTTLPFTIRKASLNMARTSQFIYQHGDDQTMPTVNDLVNVLLFTPSSKSREESDTNFVV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1154 579 CDD Terpene_cyclase_plant_C1 57 565 IPR044814 GO:0010333|GO:0016102
Pvu5g1154 579 Pfam Terpene synthase family, metal binding domain 247 512 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu5g1154 579 Gene3D - 86 242 IPR036965 GO:0010333|GO:0016829
Pvu5g1154 579 SFLD Terpene Cyclase Like 1 C Terminal Domain 245 563 IPR034741 -
Pvu5g1154 579 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 62 241 IPR008930 -
Pvu5g1154 579 SUPERFAMILY Terpenoid synthases 244 553 IPR008949 -
Pvu5g1154 579 SFLD Isoprenoid Synthase Type I 245 563 - -
Pvu5g1154 579 Pfam Terpene synthase, N-terminal domain 57 202 IPR001906 GO:0010333|GO:0016829
Pvu5g1154 579 Gene3D Farnesyl Diphosphate Synthase 61 552 IPR008949 -
Pvu5g1154 579 PANTHER OS04G0344100 PROTEIN-RELATED 49 565 - -
Pvu5g1154 579 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 49 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1154 Pvu-Chr5 32649767 32655041 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1154 - - gmx:100806124 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1154 5 32649767 32655041 Pvu5g1154 5 32649767 32655041 ECH
Pvu5g1154 5 32649767 32655041 Pvu11g1104 11 12710937 12715605 PCT