Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1104 ATGACTCTTGTCAATGTCATGTTGCTCAATTCCTCTTCTATTTCATATGTCACTTTCGCCAAACCTCTGAAACCAGTAGCTCCTAATCTTCTCCACCGTAGAATAATCTTCCCTCGATGCAACGCAACCACCACCAACGTTAACGTTTCTGAAAGAAAATCTGCAAACTACCAACCCAACCTCTGGAGTTACGACTTTCTGCAGTCCTTGAAGCATTCATACGCAGATACAAGATATGAGGACAGGGCCCAGCAGCTGCAAGAGGAAGTGAGGAAAATGATAAAGGATGAAAATTCAGATATGTGGCTCAAACTTGAACTCATTAACGATGTGAAACGCTTGGGCCTGAGTTACCATTATGACAAGGAGATAGGAGAAGCCCTTCTTAGGTTTCACTCTTCTGCAAGATTTAGTGCAACAATCGTTCACAGAAGCTTGCATGAAACTGCTTTGTGCTTCAGGCTTATGAGAGAATATGGCTATGATGTCACTGCAGATATATTTGAGAGGTTCAAGGAGCAGAATGGTGAATTCAAGGCAAGCCTTATGGGTGATGTGAAGGGAGTGTTGAGTCTGTACGAGGCATCGTTTCTTGGCTATGAAGGAGAACAGATTCTGGATGATGCCAGGGCCTTCTCCAGCTTCCATCTTAGAAGTGCACTCAATGAAGGTAGAAGTAGTAATAACATGGTTTTGGAAGAAGTGAATCATGCATTGGAGCTTCCACTGCATCACAGAATCCAAAGGCTGGAAGCCAGGTGGTATATTGAACACTATGCTAAAAAAAGAGACTCAAACCGAGTGCTGCTTGAAGCAGCAAAACTTGATTTCAATATTCTGCAGTCAACCCTGCAAAATGATCTCCAAGAAGTCTCAAGGTGGTGGAAGGGAATGGGACTAGCATCAAAGTTAAGCTTCAGCCGAGACAGACTAATGGAATGCTTCTTTTGGGCTGTTGGAATGGTCTTCGAGCCTCAGTTGAGTGATCTGCGCAAAGGTTTAACAAAAGTTGCTTCCTTAATAACTACAATCGATGACGTTTATGACGTGTATGGCACCTTAGAGGAATTAGAGCTTTTCACAGCAGCTGTAGAAAGTTGGGATGTTAAAGCCATTCATGTTCTCCCTGATTACATGAAGATATGTTTTCTGGCACTGTACAACACTGTCAACGAATTTGCCTATGATGCACTTAAAGAACAAGGACAAGATATTCTACCCTATCTCACCAAAGCATGGTCTGATATGTTGAAAGCATTCCTACAAGAAGCCAAATGGAGTCGAGACAGGCACATGCCAAGATTCAACGATTACCTCAACAATGCACGGGTCTCAGTCTCTGGGGTAGTTATACTCACCCATGCTTATTTCTTGCTAAACCACCGGATCACAGAAGAGGCACTTGAGTCCTTGGACAGTTACCACTCCCTCTTACAGAATGCCTCCATTGTTTTTCGACTTTGCAATGATTTGGGTACATCAAAGGCAGAGTTAGAGAGAGGGGAAGCAGCAAGCTCCATTCCATGTTACATGCGAGAAAGTGGTGCTAGTGAAGAGGGTGCTTACAAACACATCTTTAGTTTGCTTAATGAAACGTGGAAGAAGATGAACAAAGATCGAGTGTCGCAGTCTCCTTTCCCAAAAGCTTTCGTAGAAACAGCTATAAACCTTGCAAGAATTTCTCACTGCACATACCAGTTTGGAGATGGACATGGAGCCCCAGATAGCACTGCCAAAAATCGCATACGATCTTTGATAATTGAACCCATTGCACTGTACGAGATGGAGATTTCCACAAGTTCTTAA 1806 0.4313 MTLVNVMLLNSSSISYVTFAKPLKPVAPNLLHRRIIFPRCNATTTNVNVSERKSANYQPNLWSYDFLQSLKHSYADTRYEDRAQQLQEEVRKMIKDENSDMWLKLELINDVKRLGLSYHYDKEIGEALLRFHSSARFSATIVHRSLHETALCFRLMREYGYDVTADIFERFKEQNGEFKASLMGDVKGVLSLYEASFLGYEGEQILDDARAFSSFHLRSALNEGRSSNNMVLEEVNHALELPLHHRIQRLEARWYIEHYAKKRDSNRVLLEAAKLDFNILQSTLQNDLQEVSRWWKGMGLASKLSFSRDRLMECFFWAVGMVFEPQLSDLRKGLTKVASLITTIDDVYDVYGTLEELELFTAAVESWDVKAIHVLPDYMKICFLALYNTVNEFAYDALKEQGQDILPYLTKAWSDMLKAFLQEAKWSRDRHMPRFNDYLNNARVSVSGVVILTHAYFLLNHRITEEALESLDSYHSLLQNASIVFRLCNDLGTSKAELERGEAASSIPCYMRESGASEEGAYKHIFSLLNETWKKMNKDRVSQSPFPKAFVETAINLARISHCTYQFGDGHGAPDSTAKNRIRSLIIEPIALYEMEISTSS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1104 601 CDD Terpene_cyclase_plant_C1 52 589 IPR044814 GO:0010333|GO:0016102
Pvu11g1104 601 SFLD Terpene Cyclase Like 1 C Terminal Domain 265 591 IPR034741 -
Pvu11g1104 601 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 58 263 IPR008930 -
Pvu11g1104 601 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 265 591 - -
Pvu11g1104 601 Pfam Terpene synthase, N-terminal domain 62 239 IPR001906 GO:0010333|GO:0016829
Pvu11g1104 601 PANTHER TERPENE SYNTHASE 12-RELATED 42 591 - -
Pvu11g1104 601 Coils Coil 76 96 - -
Pvu11g1104 601 Gene3D Farnesyl Diphosphate Synthase 59 580 IPR008949 -
Pvu11g1104 601 Gene3D - 99 265 IPR036965 GO:0010333|GO:0016829
Pvu11g1104 601 SUPERFAMILY Terpenoid synthases 266 590 IPR008949 -
Pvu11g1104 601 PANTHER OS04G0344100 PROTEIN-RELATED 42 591 - -
Pvu11g1104 601 Pfam Terpene synthase family, metal binding domain 270 535 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1104 Pvu-Chr11 12710937 12715605 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1104 K12742 K19968 gmx:100782452 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1104 11 12710937 12715605 Pvu11g1104 11 12710937 12715605 ECH
Pvu5g1154 5 32649767 32655041 Pvu11g1104 11 12710937 12715605 PCT