Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1149 ATGTTTGGTTCCACACTCCGAAACTCGATAGCTATTGATTCTGTAGCCATGCCTGAGGCTCCAAAGCACCTGTGCCACGACCCAAAACAGCTTCAAGATGGTGGTGGTGGTGGTGATGGTAGTAGCACTAGTATGATCCAGGAGAATAAGAGAGCCCTGGAGTACATTGAAGAGGTCACCAGAAACGCTGATGAAATCCAAGAAAAGGTGCTTGCAGAGATCCTTTCTTGCAGTGCACAAGCTGAGTACCTCCAACGCCATGGCCTAGATGGTCGCACTGACAGAATCACTTTCAAAAAGCTCGTGCCAGTGGTCAATTACGAGGATTTGAAGCCTGATATTGATCGAATAGCCAACGGTGATACCTCCCCAATTTTATGTTCCAAACCCATCTCAGAATTTCTCACTAGCTCTGGAACGTCTGGTGGGGAGAGAAAACTGATGCCTACCATCGAAGAGGAACAAGAGAGAAGAACATTGCTTTATAGCCTGTTGATGCCAGTGATGGATCAGTTTGTGCCTGGTTTGGACGAAGGCAAAGGCATGTACTTTCTGTTCACAAAATTAGAAGCCAAAACTCCTTCTGGACTCCTTGCTCGTCCAGTTCTCACCAGCTATTACAAAAGCTCACATTTCAAGCCCCAGAAACATGATCTCTATACAAACTACACAAGTCCCAATGAAACCATTCTCTGCCCTCACTCTTACCAAAGCATGTACTCTCAGTTGCTCTGTGGCCTTTGCCAAAACCGGGAAGTTCTTCGCGTTGGGGCAGTCTTCGCCTCCGGTTTCATTCGTGCCCTTAAGTTCCTCGAGAAGCACTTCGTTTGTTTGTGCAATGACATAAGAACGGGCACCCTAGACACCAAAATCACTGACCCCTCAGTGAGAGAAGCTGTGATGAAAGTACTCAAACCAAATCCTGAGCTTGCGGATTTCATTGAAGCCGAATGCGTGAAGGGATCGTGGAAGGGAATCATTACCAGGATATGGCCTAACACCAAGTATGTTGATGTTATTGTCACGGGAACCATGTCTCAGTATATTCCCATATTGGATTATTATAGCAATGGTCTTCCTCTTGTGTGCACCATGTATGCTTCTTCTGAGTGCTACTTTGGCTTGAACCTGAACCCCTTGTGTAACCCAAGTGAGGTGTCTTACACACTCATTCCCACCATGGCCTACTTTGAATTCTTGCCTGTCGATCAGATCAATGGACATACTGATTCCATTTCTAACCTAGAGCATGAACATTTGGTAGATCTTGTTGATGTGAAGATGAATCAAGAGTATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGGTACCGGGTTGGCGACATCCTCCGTGTAGCCGGATTCAAGAACAAGGCTCCTCAGTTCAACTTCGTGTGTCGAAAGAATGTGGTTCTCAGCATTGATTCTGACAAAACCGACGAAGTTGAGCTCCACAATGCTGTGAAAACTGGTGCAGACCACCTTCCACAATTTGGTGCATCTCTCACTGAATACACCAGTTGCGTGGACACGTCAACAATCCCAGGCCACTACGTTCTCTACTGGGAAATCAACAAAAATGGCCAAACCATAGAAATTCCTTCTTCCGTTTTTGGTGATTGTTGCCTGGCCATTGAAGAATCTCTGAACAGCGTGTATCGGCAGGGAAGGGTATCAGAGTGTATTGGAGCCTTGGAAATTAGGGTGGTTGAGGATGGCACGTTTGACAAACTCATGGACTTTGCTCTTAGCCAAGGTGCCTCCATAAACCAATACAAGACCCCTCGTTGCGTCACTTATGTGCCCATTCTCGACCTTCTCAACTCCAAAGTTGTTTCCAATTACTTCAGCCCCAAATGCCCAAATTGGGTCCCTGGTCACAAGAATTGGTGCACCCTTCATTGA 1908 0.4628 MFGSTLRNSIAIDSVAMPEAPKHLCHDPKQLQDGGGGGDGSSTSMIQENKRALEYIEEVTRNADEIQEKVLAEILSCSAQAEYLQRHGLDGRTDRITFKKLVPVVNYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEEQERRTLLYSLLMPVMDQFVPGLDEGKGMYFLFTKLEAKTPSGLLARPVLTSYYKSSHFKPQKHDLYTNYTSPNETILCPHSYQSMYSQLLCGLCQNREVLRVGAVFASGFIRALKFLEKHFVCLCNDIRTGTLDTKITDPSVREAVMKVLKPNPELADFIEAECVKGSWKGIITRIWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCNPSEVSYTLIPTMAYFEFLPVDQINGHTDSISNLEHEHLVDLVDVKMNQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELHNAVKTGADHLPQFGASLTEYTSCVDTSTIPGHYVLYWEINKNGQTIEIPSSVFGDCCLAIEESLNSVYRQGRVSECIGALEIRVVEDGTFDKLMDFALSQGASINQYKTPRCVTYVPILDLLNSKVVSNYFSPKCPNWVPGHKNWCTLH* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1149 635 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 42 631 - -
Pvu5g1149 635 Coils Coil 49 69 - -
Pvu5g1149 635 Pfam GH3 auxin-responsive promoter 56 600 IPR004993 -
Pvu5g1149 635 MobiDBLite consensus disorder prediction 24 44 - -
Pvu5g1149 635 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 42 631 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1149 Pvu-Chr5 32540601 32544506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1149 42 618 EF-hand Containing Proteins AT1G23160 49.488 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1149 K14487 - gmx:100818961 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1149 5 32540601 32544506 Pvu5g1149 5 32540601 32544506 ECH
Pvu5g1149 5 32540601 32544506 Pvu11g1117 11 13157651 13162297 PCT