Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1117 ATGCCTGAGGCTCCTAGCCACTACCTGTGCAACAACCCAAATGGCAAAGTTGATGATGATGTTGTTATCACCAAGAACAACAACAACAAAGCACTGGAATACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGACAAGGGTCCTTGCTGAGATCCTCTCCTCTAGTGCACATGCTGAGTACCTTCAACGCCATGGCTTAGATGGGCGCACAGAGAGAGAGAGTTTCAAGAAGATCATGCCTGTGGTCACATACGAGGATTTAAAGCCAGATATTGATCGTATAGCTAATGGTGATACCTCCCCAATTTTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACCATAGAAGATGAACTTCAGAGGAAATCATTACTCTACAGTCTCTTGATGCCAGTGATGGACCAATTTGTTCCAGGTTTAGAGAAAGGCAAGGGCATGTACTTTTTGTTCGTAAAATCAGAAGCCAAAACCCCAGGGGGGCTCCTAGCTCGTCCAGTTTTAACCAGTTACTACAAAAGCTCACATTTCAAGAACCCTAAACAAAGATATGATCCCTACACAAACTACACTAGTCCAATTGAGTCCATTCTCTGCCTAGACTCTTACCAAAGCATGTATTCTCAGATGCTTTGTGGACTTTCTCAAAACGAACAAGTTCTTCGTGTTGGGGCTGTTTTCTCCTCGGGCTTCATCCGTGCCATCAAGTTCCTAGAAAAGCATTGGGTGAGTTTGTGCCACGACATAAGATATGGCACCATAGACCCTGAAATCAGTGACTCTTCTGTTAGAGAGGCCATCATGAAGACACTCAAACCAAACCCCAAGCTTGCGGATTTCATAGAAGGTGAGTGCAAGAAGGAGTCGTGGAAGGGGATCATCACTAGGGTGTGGCCAAACACCAAGTATGTGGATGTTATTGTTACTGGAACCATGTCTCAGTATATTCCGATATTGGATTACTACAGCAATGGTCTCCCTCTTGTCTGCACCATGTATGCTTCGTCTGAGTGTTACTTTGGCCTCAACTTGAACCCTTTGTGTGAACCCAGTGAGGTTTCTTACACCCTCATTCCCACAATGGCTTACTTTGAGTTCTTGCCCCTCAATAAGACGAAGGGACATGCCAATTCTATTTCTCACCCTGAGCACGAACATTTGGTTGATCTTGTGGATGTGGAGTTGGGTAAAGAATATGAGCTTGTGGTCACCACTTATGCGGGACTTTACAGGTACCGGGTTGGTGACATACTCCGTGTAGCAGGATTCAAGAACAAGGCACCTCAATTCAACTTCGTGTGCCGAAAGAATGTGGTTTTGAGCATTGATTCTGACAAGACCGATGAAGTTGAGCTGCAAAATGCTGTGAAGAATGGAGCAAACCGTCTTGCAGAGTTCGATGCATCACTCACAGAATACACAAGCTGTGCTGACACGTCCACTATCCCGGGACACTATGTGCTGTACTGGGAGATTAGCACGAATGATGAAACCCCAATTCCTGGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTGTCTGAACAGTGTGTATAGACAAGGAAGGGTAGCAGAGTCCATTGGAGCATTGGAAATCAAGATTGTGGAGAATGGAACCTTTGACAAGCTTATGGATTTTGCTCTGAGCCAGGGTGCGTCCATAAATCAGTATAAGACACCTCGTTGTGTGAATTATGCTCCCATTATTGAACTTCTGGACTCCAAAACAGTTTCCAGTTACTTCAGTACAAAATGTCCACAGTGGGTCCCTGGTCACAAGAAATGGTGCATGTACCCTTGA 1848 0.4491 MPEAPSHYLCNNPNGKVDDDVVITKNNNNKALEYIEDVTSNADEIQTRVLAEILSSSAHAEYLQRHGLDGRTERESFKKIMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEDELQRKSLLYSLLMPVMDQFVPGLEKGKGMYFLFVKSEAKTPGGLLARPVLTSYYKSSHFKNPKQRYDPYTNYTSPIESILCLDSYQSMYSQMLCGLSQNEQVLRVGAVFSSGFIRAIKFLEKHWVSLCHDIRYGTIDPEISDSSVREAIMKTLKPNPKLADFIEGECKKESWKGIITRVWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCEPSEVSYTLIPTMAYFEFLPLNKTKGHANSISHPEHEHLVDLVDVELGKEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANRLAEFDASLTEYTSCADTSTIPGHYVLYWEISTNDETPIPGSVFEECCFAVEGCLNSVYRQGRVAESIGALEIKIVENGTFDKLMDFALSQGASINQYKTPRCVNYAPIIELLDSKTVSSYFSTKCPQWVPGHKKWCMYP* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1117 615 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 611 IPR004993 -
Pvu11g1117 615 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 20 611 - -
Pvu11g1117 615 Pfam GH3 auxin-responsive promoter 35 580 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1117 Pvu-Chr11 13157651 13162297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1117 32 599 EF-hand Containing Proteins AT1G23160 49.481 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1117 K14487 - gmx:100783196 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1117 11 13157651 13162297 Pvu11g1117 11 13157651 13162297 ECH
Pvu5g1149 5 32540601 32544506 Pvu11g1117 11 13157651 13162297 PCT