Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1118 ATGGAGGTAGAGAGTGAAAAATCAGGGTCTGATGGGAAAGTTTGGAGTTTTTGTAGAATGCCATTTTGGCAAACAACTCACACTCCATCTTCTTCTTCTTCTTCATCTTCCATGTCTTACAACATGCACAATGTCCATCAGCAAAATCAGAATAATCTTCAATCTGTTGATAGATCCGGTCAGCATTCTTCAACCACAGTCTTATCTGTGGCAAAGTCTCTGCTCCCTACAAAGAGGAGGCTTCGTCTTGATCCTACCAACAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTGGAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACAGCACCCAAGAGTTGTTATATGCGTCCTCCAGGTGGTGTTCTTGCCCCTGGTGAAAGTATAATTGCTACTGTATTCAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAAAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTAAAAGTGCAAGGTGAAATCGACTATGTACCGGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTACGGGTTATTTTTGTGGACCTTGAACGGCCTAGTCCTGCACTGGATAAGCTCAAACGGATGTTGGCCGAGGCTGATGCAGCTCTTGAAGTGCGACAGAAACCGCCGGAGGAGAAAGGTCCTCGAGTAGCCGGTGAAGGCCTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACTTGGCCCAACAGCAGGTCGAAGGTGTTGATTCAGTGTAA 807 0.4325 MEVESEKSGSDGKVWSFCRMPFWQTTHTPSSSSSSSSMSYNMHNVHQQNQNNLQSVDRSGQHSSTTVLSVAKSLLPTKRRLRLDPTNKLYFPYEPGKQVRSAIAIGNTCKSHVAFKFQTTAPKSCYMRPPGGVLAPGESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVQGEIDYVPELFDEQRDQVAIEQILRVIFVDLERPSPALDKLKRMLAEADAALEVRQKPPEEKGPRVAGEGLVIDEWKERRERYLAQQQVEGVDSV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1118 268 Gene3D Immunoglobulins 76 204 IPR013783 -
Pvu5g1118 268 ProSiteProfiles Major sperm protein (MSP) domain profile. 80 202 IPR000535 -
Pvu5g1118 268 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 267 IPR016763 GO:0005789
Pvu5g1118 268 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 267 - -
Pvu5g1118 268 Pfam MSP (Major sperm protein) domain 81 191 IPR000535 -
Pvu5g1118 268 SUPERFAMILY PapD-like 71 209 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1118 Pvu-Chr5 31667767 31671515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1118 - - var:108334494 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1118 5 31667767 31671515 Pvu5g1118 5 31667767 31671515 ECH
Pvu5g1118 5 31667767 31671515 Pvu11g1142 11 14333949 14337866 PCT