Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1142 ATGGCGGTGGAGAGTGACAAAACGGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGTATGCCATTTTGGCAAACAACTCATCCTTCTTCATCTTCTTCTTCAACTTCCTCTATGCATAACAGTGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTTTGCTTCCCACAAGGAGAAGGCTACGTCTTGATCCTCCCAGCAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCACCATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATACTTGCACCCGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTCAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTTGCAGTGGAGCAAATTTTGCGAGTCATTTTTCTGGACCCTGAGCACCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGTTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAGTAGCTGGTGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAAGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 795 0.4465 MAVESDKTGSDGKVWSFCSMPFWQTTHPSSSSSSTSSMHNSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPSKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPEHPSPALDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLAKQQVEVVDSV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1142 264 MobiDBLite consensus disorder prediction 27 67 - -
Pvu11g1142 264 Pfam MSP (Major sperm protein) domain 77 187 IPR000535 -
Pvu11g1142 264 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 32 263 IPR016763 GO:0005789
Pvu11g1142 264 SUPERFAMILY PapD-like 65 205 IPR008962 -
Pvu11g1142 264 Gene3D Immunoglobulins 72 202 IPR013783 -
Pvu11g1142 264 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 32 263 - -
Pvu11g1142 264 ProSiteProfiles Major sperm protein (MSP) domain profile. 76 198 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1142 Pvu-Chr11 14333949 14337866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1142 - - gmx:100820576 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1142 11 14333949 14337866 Pvu11g1142 11 14333949 14337866 ECH
Pvu5g1118 5 31667767 31671515 Pvu11g1142 11 14333949 14337866 PCT