Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1113 ATGAAAACGCCGAACGGTTCACCGGTTTCTAGTCCATCTCCGAAACCTCGTCGACTCCGACACAGCGAATCAAGTTCACGGTTTCTCCCTTCACCTCCCAACTCAACCACACACTCCGCTGAATGCCACTCCCCGGTCCGCCGCAAATCCTCGAGCCCAAACCGGCGCAACGCCATCCCGGAGGACACGGGTCCCACGCGCCACCAACTATGGCCTTCCTCTACGGTGGCGAAGAGAAACTCCGGTACCCTCGCCGATCACATCACCGAAGACAGAATCATAGAGGGCACAACTAATACACCCATCATCACTGGTGGCTCCGCGAGACACGTGGCGAAATTAGTAACACCCTCAGAATCACCATCTTCTAAGAGACCGGTTTATAGCAACATGGCTCCTGGAAGATTGTTGCTGGACGAGAACGCCAAGTCCTTCTCTTCGCGGAGACACTCTGGTTCTTCCAGAAACACTCTCGATTCGGAACCTGATGTGGAGGTTGGACCTTCGAGTGTTGCAACAACAGCGTTGAGAAGGTCTCGAAGGGGAACTTCGGATTCCAATATTGCGAACTTGAACAGTGAGTCCTCGGTTGTGAAACGGTTCACGTTGAAAACGGCTATTAGGAGGGCTAATTCGCTTGCTGGATCGTACAAGAGTTCGAACTCTTCGTGGGCTTTGTCTCCTGGGAGAGCGGAGTCGCCGGCTATGTCGGTTGAGAGCATGGATAAACCGATGTCGTTTTCGGGCTTCAAGCACCATGCCACTAGTCCTACTACCAAGGTGAAAGGGGTGGAGAAGTTGCTCAACATGGGTTTTGATCTCTTTAAGAGTAAGAAAAGTGGTGGGTTTGGGTCTCTTTCGCCGATTGGTTTTGGTGTTAACTCGGAGGTAGTTCTTAAGCTTCGTTTGTTTGATAATCGGTTGATGCAATGGCGGTTTGCGAATGCTAGAGCTCAGGTTGTTAATGGAACCATTTCTCACAAGGCTGAGAGCAATTTGATATGTGTTTGGGATGCTCTCACAAAGTTACAACGTTCTGTTCTGAAAAAGAAGATACAATTTGTCAGAGAAAAACTTGAAATGAAGATCGCTTTTGTTCTGTATTCTCAGATGAAGCCATTGGAATCTTGGGTAGGTATGGAAAGACAACACTTGCAAGCAATTACAGCCATCAAAGAGTGTCTGCATTCGGTTGTTTGCAGAGTTCCTCTTTTGGAAGGTGCTAGGGTGAACATGCAATCAACATCTATTGCTCTACGGCATGCAGCTGATCTCACGGCTCGCATCAAGTCAACTTTAACTACTTTATCATCTTCCGAGGTTGATAAGATTGCTGCAATGCTATCAGAATTAGCAAAAGTTGTAGCACAAGAGAAACAGTTCTTAGAAGAGTTCTATGATCTTTTCCAGGCCATATATGTGTTTGAGGTTCAAGAAAGAAGTGTAAAGTGCAATCTCGTTCAACTAGAAGGTTGGCAACAAAATTATGAACTGCAACGACCACTACCGCAGATCACTTCGTAG 1524 0.4744 MKTPNGSPVSSPSPKPRRLRHSESSSRFLPSPPNSTTHSAECHSPVRRKSSSPNRRNAIPEDTGPTRHQLWPSSTVAKRNSGTLADHITEDRIIEGTTNTPIITGGSARHVAKLVTPSESPSSKRPVYSNMAPGRLLLDENAKSFSSRRHSGSSRNTLDSEPDVEVGPSSVATTALRRSRRGTSDSNIANLNSESSVVKRFTLKTAIRRANSLAGSYKSSNSSWALSPGRAESPAMSVESMDKPMSFSGFKHHATSPTTKVKGVEKLLNMGFDLFKSKKSGGFGSLSPIGFGVNSEVVLKLRLFDNRLMQWRFANARAQVVNGTISHKAESNLICVWDALTKLQRSVLKKKIQFVREKLEMKIAFVLYSQMKPLESWVGMERQHLQAITAIKECLHSVVCRVPLLEGARVNMQSTSIALRHAADLTARIKSTLTTLSSSEVDKIAAMLSELAKVVAQEKQFLEEFYDLFQAIYVFEVQERSVKCNLVQLEGWQQNYELQRPLPQITS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1113 507 MobiDBLite consensus disorder prediction 172 189 - -
Pvu5g1113 507 MobiDBLite consensus disorder prediction 143 189 - -
Pvu5g1113 507 MobiDBLite consensus disorder prediction 1 84 - -
Pvu5g1113 507 MobiDBLite consensus disorder prediction 25 41 - -
Pvu5g1113 507 MobiDBLite consensus disorder prediction 67 82 - -
Pvu5g1113 507 PANTHER AUGMIN FAMILY MEMBER 14 499 - -
Pvu5g1113 507 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 14 499 - -
Pvu5g1113 507 Pfam QWRF family 172 463 IPR007573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1113 Pvu-Chr5 31623153 31625949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1113 - - vra:106770120 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1113 5 31623153 31625949 Pvu5g1113 5 31623153 31625949 ECH
Pvu5g1113 5 31623153 31625949 Pvu11g1152 11 14646603 14649385 PCT