Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1152 ATGAAGAGCGATTCCAATGACTCTGTCTCCCCTTATTCTCCCAAACACAGAACTCGTCTTGTAACTTCCCGGTTCATGTCTCCAAATTCAACCGCTTCGCCTGAACCTGGTTCAGGCTCCCCGCTCCGCCGGTTCAACCGCTTGGCGAGGAAAGACTCCGCCACTCTGGCTGATCACATTGGCAACGACAGGCTCAAAGAAAGGGAAGAATACCACCACCATCAGAATCAGAAACCCACAAACAGAACAGGCTCTGTTTTCTCTGCTCTCACGAAACAGAGAAGCTGCAGGGAGTTCAGAAACAACACCAACTGCTTAGAAGAAAACGATCAAGATCGAGATGTTATTGGTAGGATCATGAAGAATGGTGTCTCCGGAAAATCTTCTTCTTCTTCTCCTGTGGTGAAGAAACCAAGTTCTTATCTTGATCCTGCGAGACAGTCTCTGGATGAGAATACCTTTAAGGGAAGCTTTCTTTATGCTAAGAACTCAATTAATTCGGAATCGGAAAATATGAGTTTGGATTCTGTTTCTCCGCAAAGAGCATTCAGTTCGAGAAAATTGGGTAGGGAGGTTTCTTCTAAGTACAAGGTAGCATGTGACAGAAAAGGAGAAGCTTCTGATTCAGACCCTTTCTCTTTTGATGATTCATGGATGATGAAGAAGTTTATCACACAGAAAGCGGTGAAGAAGGCTAATTCACTTATTGGGTACATGAGTTCCAAGTCTCAGTGGGCATTGTCTCCTGGGAGATCAGGATCACCACCTTTCTCTTTCGAAAACAAGGATAAACCATTGTCGTTTTCGAGCTTGAAACCTCCACACAAGAGAGTGGAGAAGATTCTGAGCATGGGTTTTGATCTCTTTAGGACTAAAAAATCTTTTTCTACTAGCGAGATGGTTCATCAATTGCGTATGCTTCATAACCGGTTGATTCAATGGCAGTTCACAAATGCTAGAGCTCATTCGGTGAATCACTCCATGTCTCTACAGGCTGAGAGCAATTTGATAAGTGTTTCGGATGGTCTAACCAAGTTGCGGCATTCAGTGATGCAAAAGAAGATAGAGGTCGAGAGGGAAAAGCTCAAAATGAAGCTAAATTTTGTACTGCATTCTCAAATGAAGCTGTTGGAAAGGTGGGCATGTATAGAAAGGCAACATTTAGCTGCAATTACCACCATGAAAGAGTGTTTGCATTCTGTTATATGCAAAGTTCCTCTCTTGGAAGGGGCAAAGGTGGATATACAATTGGTATCCATTGCTCAGCTGTATGCATCTGATCTGACAGATTCCATCAAGTCAGTGTTATCTAGTTTTTCACCCTTGGCTTATAAGACATCTGAATTGATATCAAAATTAGCAAGAATTGTAGCTCAAGAGAAGTTGCTGTTACAGGAGTTCAATGATGTGTTCCACGACATTTGTGTTCTTGAGCTTAAAGAAAGGAGCCTAGTCTGCAGTCTCATTCAACTCCAATGTTGA 1482 0.4265 MKSDSNDSVSPYSPKHRTRLVTSRFMSPNSTASPEPGSGSPLRRFNRLARKDSATLADHIGNDRLKEREEYHHHQNQKPTNRTGSVFSALTKQRSCREFRNNTNCLEENDQDRDVIGRIMKNGVSGKSSSSSPVVKKPSSYLDPARQSLDENTFKGSFLYAKNSINSESENMSLDSVSPQRAFSSRKLGREVSSKYKVACDRKGEASDSDPFSFDDSWMMKKFITQKAVKKANSLIGYMSSKSQWALSPGRSGSPPFSFENKDKPLSFSSLKPPHKRVEKILSMGFDLFRTKKSFSTSEMVHQLRMLHNRLIQWQFTNARAHSVNHSMSLQAESNLISVSDGLTKLRHSVMQKKIEVEREKLKMKLNFVLHSQMKLLERWACIERQHLAAITTMKECLHSVICKVPLLEGAKVDIQLVSIAQLYASDLTDSIKSVLSSFSPLAYKTSELISKLARIVAQEKLLLQEFNDVFHDICVLELKERSLVCSLIQLQC* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1152 493 MobiDBLite consensus disorder prediction 123 137 - -
Pvu11g1152 493 Pfam QWRF family 185 465 IPR007573 -
Pvu11g1152 493 MobiDBLite consensus disorder prediction 1 37 - -
Pvu11g1152 493 PANTHER AUGMIN FAMILY MEMBER 15 492 - -
Pvu11g1152 493 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 15 492 - -
Pvu11g1152 493 MobiDBLite consensus disorder prediction 1 54 - -
Pvu11g1152 493 MobiDBLite consensus disorder prediction 122 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1152 Pvu-Chr11 14646603 14649385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1152 - - var:108339347 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1152 11 14646603 14649385 Pvu11g1152 11 14646603 14649385 ECH
Pvu5g1113 5 31623153 31625949 Pvu11g1152 11 14646603 14649385 PCT