Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1108 ATGAGTAACTACGATACCAATCCCTTCGCCGAAGACGAGGTTAATCCCTTCGCCGATGGAGCTGCTCAGGGAAAAGCATCAGGGCAATCAAATCATGGTGGTGGTGCATTCTATAATACCAACTCAGGAAGAGCTTCTGCAACCTCAAAGCTTTCACCCCTGTCTCCTGAGCCTTATGATCGTGCAGCAACTGTTGACATTCCTCTCGATTCCTCAAAGGATCTCATAGCTAAGGAGAAGGAGCTCCAAGCCAGAGAAGCGGAATTGAACAGAAGGGAACAGAGTCTAAAACGAAAGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCGCCTATTTTCCCTATCATTCATCACGACATTGCAAAAGAAATACCACTACATCTTCAATCAATCCAGTACGTTGCATTTACAACATGGTTGGGTTTGATTGCCTCTCTTTTATGGAATATTATAGCAGTTACTGTAGCTTGGATCAAAGGAGAAGGTCTTTCAATCTGGTTTCTAGCTATCATATACTTTATTTCCGGTGTGCCAGCATCTTATGCTATGTGGTATCGACCTCTTTATCGTGCTACAAGGACGGACAGTGCTCTAAAGTTTAGCTGGTTTTTCATGTCTTACTCGGTGCACATTATCTTTTGCGTTTTTGCTGCAGTTGCTCCTCCAGTTGTCTTCAAAGGGAAATCTCTCACAGGTATTCTACCTGCATTTGAGGTATTGGACGACAATACAATGGTTGGGATATTTTACTTCATTGGGTTCGGATTTTTCAGCATTGAATCACTGCTGAGCATTTGGGTTATTCAGCAAGTATACATGTACTTCAGGGGCAGTGGCAAGGCTGCAGAAATGAGGCGCGAGGCTGCAAAAGGGGCCATGAGGGCAGCTCTATGA 912 0.4408 MSNYDTNPFAEDEVNPFADGAAQGKASGQSNHGGGAFYNTNSGRASATSKLSPLSPEPYDRAATVDIPLDSSKDLIAKEKELQAREAELNRREQSLKRKEDAIARAGIVIEEKNWPPIFPIIHHDIAKEIPLHLQSIQYVAFTTWLGLIASLLWNIIAVTVAWIKGEGLSIWFLAIIYFISGVPASYAMWYRPLYRATRTDSALKFSWFFMSYSVHIIFCVFAAVAPPVVFKGKSLTGILPAFEVLDDNTMVGIFYFIGFGFFSIESLLSIWVIQQVYMYFRGSGKAAEMRREAAKGAMRAAL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1108 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 303 IPR007273 GO:0015031|GO:0016021
Pvu5g1108 303 MobiDBLite consensus disorder prediction 1 59 - -
Pvu5g1108 303 Coils Coil 72 102 - -
Pvu5g1108 303 MobiDBLite consensus disorder prediction 24 53 - -
Pvu5g1108 303 Pfam SCAMP family 112 283 IPR007273 GO:0015031|GO:0016021
Pvu5g1108 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1108 Pvu-Chr5 31450067 31460557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1108 2 303 Miscellaneous Gene Families AT1G11180 61.489 3.09e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1108 K19995 - gmx:100820206 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1108 5 31450067 31460557 Pvu11g1157 11 14785551 14794319 PCT