Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1157 ATGAGTCGCTACGATCCCAATCCCTTCGAGGAAGAAGATGTCGAGGTTAATCCCTTCGCGGATGGACAGGCTAAAGGAAAAGGGTCAAGTTATAGTGGAGGTGCATTTTACACAACTGACGTCAAAGCAAAGGAGAAGGAACTTCAAGCTAGAGAAGCTGACTTGAAAAGAAGGGAGCAGGAACTAAAACGAAGGGAAGATGCCATATCACGAGCTGGAATAGTCATAGAGGAAAAAAATTGGCCACCTTTTTTCCCCATCATTCATCATGACATTGGAAAAGAAATACCAATACATCTTCAAAGGATCCAATACATTGCATTTTCCACATGGTTGGGTTTGGTTCTGTGTCTTGTATGGAATATTGTGGCGGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCGATTATCTATTTTATTTCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTCTATCGAGCTATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTTTTCTTGGTTTACGTGATTCACATTGCCTTCTGCATTTTCGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTGACAGGTATTTTGGCTGCGATTGACGTGTTGGGCGATAATGCACTGGTTGGGATATTCTACTTTATTGGGTTTGGATTTTTCTGTCTTGAGTCAGTGCTGAGCATCTGGGTTATACAGCAAGTATACATGTACTTCCGCGGCAGTGGCAAGGCTGCAGTTTTGAAGCGTGATGCTGCGAGAGGGACAATGATGGCAGCTCTATAA 810 0.4383 MSRYDPNPFEEEDVEVNPFADGQAKGKGSSYSGGAFYTTDVKAKEKELQAREADLKRREQELKRREDAISRAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQRIQYIAFSTWLGLVLCLVWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLVYVIHIAFCIFAAVAPPIIFKGKSLTGILAAIDVLGDNALVGIFYFIGFGFFCLESVLSIWVIQQVYMYFRGSGKAAVLKRDAARGTMMAAL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1157 269 Pfam SCAMP family 78 249 IPR007273 GO:0015031|GO:0016021
Pvu11g1157 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 39 269 IPR007273 GO:0015031|GO:0016021
Pvu11g1157 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 39 IPR007273 GO:0015031|GO:0016021
Pvu11g1157 269 MobiDBLite consensus disorder prediction 1 33 - -
Pvu11g1157 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 39 269 - -
Pvu11g1157 269 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 39 - -
Pvu11g1157 269 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1157 Pvu-Chr11 14785551 14794319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1157 40 269 Miscellaneous Gene Families AT2G20840 83.043 1.74e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1157 K19995 - gmx:100796729 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1108 5 31450067 31460557 Pvu11g1157 11 14785551 14794319 PCT