Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1104 ATGGAACCTCCTGTTCTCAGTTGCAATACTGATGCCACCACCTTCTCCAATGGCAACTGCATTAGTGACTTTGATATCATTACCTGGTTTGAAGATGTTTCCAAGAACGCTGGTTCTGTTCAGACTCAGACACTTTGCAATATTCTAAAGCAGAACTGTGGGGTTGAATATCTGAAGAAATGGTTGGGGAGCTACAATATCTCAGACATGGATGCTTGTGAGTTGGAATCTCTTTTCACTTCTCTTGTTCCCCTTGCTTCGCATGCAGATTTCGAGCCATATATCCAAAAAATTGCAGACGGAGACACTACTCCTATACTCACACAACAACCTATGACCACTCTCTCCTTAAGTTCTGGAACGACAGAGGGGAGGCAGAAGTTCGTACCCTTTACCCGCCATAGTGCTCAAACGACCCTTCAAACTTTCACTTTAGCAGCAGCCTTTAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCAAAACAAAAGGAGGTTTAACAGTTGGAACAGCCACAACACATTATTATGCAAGTGAGGAATTCAAAACCAAACAAGAGAAAACAAAGGCATTCATTTGCAGTCCCTACGAAGTTATATCGGGAGGGGATTACAAACAATCCACGTACTGTCATCTCCTTCTTGGCCTCTTCCTCTCTGATTACGTAGAGTTTATTTCCTCGGCTTTTGTCTATGGCATAGTGCAAGCTTTTTGCACCTTCGAAGAGGTTTGGAAAGACCTTTGCAATGACATTAGAGATGGGACTTTGAGTTCAAGAATCAAGTTACCCAAAATGAGAGAGGCTGTTTTGTGTATCATCTCTTCAAACCCCTCTTTGGCCTCAAAACTAGAGGCCTCTTGCTTGGAGCTAGAAGTGGTGGATTGGTTTGGTTTGGTTCCCAAACTTTGGCCTAACGCCAAGTACGTTTGTTCCATAATGACAGGTTCTATGCAACCTTACTTGAAAAAGCTTAGGCATTATGCAAATGGGGTGCCACTAGTAAGTGGTGACTATGGTTCAACTGAGAGCTGGATTGGGATTAATGTAGACCCGAGTTTGCCTCCAGAGAAGGTAACCTTTGCTGTGGTACCCACGTTCTCTTACTTTGAGTTCATACCACTTTATAGACACAAACAAGATTGCTGCTTAGTACCTGGTCATGATTTCATGGAAGACGACCCAATCCCTCTTTCCCGCGTTAAAGTTGGCCAAGAGTACGAAATAGTGCTTACAACTTTTACTGGGTTGTATAGGTGCAGACTAGGAGATGTTGTGGAAGTGGGAGGTTTCCACAATGGGACCCCAAAGTTGAATTTTATATGCAGAAGAAAACTAATTCTAACAGTGAATATAGACAAGAACACAGAGAAAGACCTTCAAATAGTGGTAGAGAAAGGGACACAGCTTCTAAACAAGGCCAAAGCTGAGCTCGTTGATTTTACAAGCTATGTAGATGTCTCCAACGAACCAGGCTGTTACGTCATTTTCTGGGAGGTGAAAGGTGAGGCTGAGGATAAGATACTTGAGGCATGCTGCAGGGAGATGGATGCGGCTTTTGTCGACCATGGTTATGTGGTTGCAAGGAAAACCAGTTCAATAGGGCCTTTGAGGCTTTGCATAGTAGAGAGAGGAACTTTCAGAAAGATTTTGGATTATTTCGTGGAGATTGGGGCAGCACTAGTGATGAATATCCACTAG 1734 0.4331 MEPPVLSCNTDATTFSNGNCISDFDIITWFEDVSKNAGSVQTQTLCNILKQNCGVEYLKKWLGSYNISDMDACELESLFTSLVPLASHADFEPYIQKIADGDTTPILTQQPMTTLSLSSGTTEGRQKFVPFTRHSAQTTLQTFTLAAAFRSRVYPTREGGRILEFIYSSNQFKTKGGLTVGTATTHYYASEEFKTKQEKTKAFICSPYEVISGGDYKQSTYCHLLLGLFLSDYVEFISSAFVYGIVQAFCTFEEVWKDLCNDIRDGTLSSRIKLPKMREAVLCIISSNPSLASKLEASCLELEVVDWFGLVPKLWPNAKYVCSIMTGSMQPYLKKLRHYANGVPLVSGDYGSTESWIGINVDPSLPPEKVTFAVVPTFSYFEFIPLYRHKQDCCLVPGHDFMEDDPIPLSRVKVGQEYEIVLTTFTGLYRCRLGDVVEVGGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQIVVEKGTQLLNKAKAELVDFTSYVDVSNEPGCYVIFWEVKGEAEDKILEACCREMDAAFVDHGYVVARKTSSIGPLRLCIVERGTFRKILDYFVEIGAALVMNIH* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1104 577 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 21 572 - -
Pvu5g1104 577 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 21 572 IPR004993 -
Pvu5g1104 577 Pfam GH3 auxin-responsive promoter 29 570 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1104 Pvu-Chr5 31383804 31387774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1104 25 572 EF-hand Containing Proteins AT1G23160 34.103 7.90e-107 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1104 K14487 - gmx:100814683 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1104 5 31383804 31387774 Pvu5g1104 5 31383804 31387774 ECH
Pvu5g1104 5 31383804 31387774 Pvu11g1162 11 14963453 14967536 PCT