Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1162 ATGCCGCAGCACCAGGCAACTGCAATGGAACCTGTTCTCAGCTACAACCCCGGCAATGGCAAGACCAACCATGACTATGATGTCATAAGCTGGTTTGAAGATGTATCCCAGAATGCTGGTTACGTTCAGACTCAGTTGCTCAGCCAGATTCTGAAGCAAAACTATGGGGTGGAGTATCTCAAGAAATGGTTGGGGAACTACAATATCCTTGAGATGGACGCATGTGCATTGGAATCCCTTTTCTCTTCTGTGGTTCCCCTTGCCTCACATGCTGACTTTGAGCCATTTATCCAAAGGATTGCTGATGGGGACACTGTTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACAACAGACGGAAGGCAGAAGTTCGTACCCTTTACTCGCCATAGTGCACAAACCACGCTTCAAATATTCACCCTAGCAGCAGCCTATAGATCAAGGGTTTATCCAATAAGGGAAGGGGGAAGGATTCTTGAATTCATATACAGCAGCAACCGGTACAAAACAAAAGGAGGTTTAACAGCCGGAACAGCCACAACACACTACTATGCAAGTGAAGAGTTCAAAATCAAGCAGCATACCACCAAGTCCTTTACCTGCAGCCCCCAAGAAGTGATTTCTGGCGGAGACTACAAACAATCCACGTATTGCCACCTCCTTCTTGGACTCTTCTTCTCTGACCAAGTGGAATTTATCACCTCAGCTTTTATCTACAGCATGGTGCAAGCTTTCAGCAGTTTTGAAGAACATTGGACTGAAATTTGCAATGACATCAGAGATGGCACTCTAAGTTCAAGAATCAAGTCACCGAAAATGAGAAAGGCTGTTTTGGACATCATCTCTCCAAGCCCAGATTTGGCTTCAAAGTTGGAAAGTGCTTGCCATGAGCTACAAGTGGTAGAGTGGTTTGGTTTAATTCCTAAACTCTGGCCAAATGCTAAATATGTCTACTCCATAATGACAGGGTCCATGCAACCATATTTAAAAAAACTTAGGCATTATGCAAATGGGTTGCCTTTGGTTAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGATCCTAGTTTACCACCAAAAGATGTAACATTCGCTGTGGTTCCCACTTTCTCTTACTTTGAGTTCATACCACTTCACAGGCATGAAAAAAATTTCAGTTCAGGAGCTGATGATTTCACGGAAGATAAGCCAATTCCACTCTCTAAGATTAAAGTAGGACAAGAGTATGAAGTTGTGCTCACAACTCTCACCGGACTATACAGGTGCAGGTTAGGGGATGTGGTGGAAGTGGCTGGCTTCCACAATGGGACCCCAAAGTTGAACTTTGTGTGTAGAAGAAAGCTAATTCTGACAGTAAATATAGACAAGAACACAGAAAAGGACCTTCAACTAGTGGTAGAGAGGGGGTCCCAAATTCTGACCAAAGCAAAAGCCGAGCTGGTTGATTTCACAAGCTATGCAGATGTGTCAAAGCAACCAGGGCACTACGTAATTTTTTGGGAGATCAAAGGGGAGGTAGAGGACAAGATCCTTGGTGCATGTTGCACTGAAATGGACAAATTGTTCATGGATCATGGCTATGTGGTGTCAAGAAAAACCAACTCAATAGGGCCCTTGGAACTCTGCATTTTGGAGACTGGGACTTTCAAGAAGGTTTTGGACAATTTCATAGCAAATGGGGCAGCCTTGAGCCAATTCAAAACCCCCAGGTGCACCAATAATCGTGCCCTCCTTAAAATTCTTAACACGTGCACCACAAAAAGGTTTCATAGCACAGCTTACAACACTCAACAATGA 1827 0.4401 MPQHQATAMEPVLSYNPGNGKTNHDYDVISWFEDVSQNAGYVQTQLLSQILKQNYGVEYLKKWLGNYNILEMDACALESLFSSVVPLASHADFEPFIQRIADGDTVPLLTQQPITTLSLSSGTTDGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSNRYKTKGGLTAGTATTHYYASEEFKIKQHTTKSFTCSPQEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFIYSMVQAFSSFEEHWTEICNDIRDGTLSSRIKSPKMRKAVLDIISPSPDLASKLESACHELQVVEWFGLIPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPKDVTFAVVPTFSYFEFIPLHRHEKNFSSGADDFTEDKPIPLSKIKVGQEYEVVLTTLTGLYRCRLGDVVEVAGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQILTKAKAELVDFTSYADVSKQPGHYVIFWEIKGEVEDKILGACCTEMDKLFMDHGYVVSRKTNSIGPLELCILETGTFKKVLDNFIANGAALSQFKTPRCTNNRALLKILNTCTTKRFHSTAYNTQQ* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1162 608 Pfam GH3 auxin-responsive promoter 31 585 IPR004993 -
Pvu11g1162 608 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 22 605 - -
Pvu11g1162 608 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 22 605 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1162 Pvu-Chr11 14963453 14967536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1162 27 602 EF-hand Containing Proteins AT1G23160 34.856 6.32e-120 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1162 K14487 - gmx:100792358 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1162 11 14963453 14967536 Pvu11g1162 11 14963453 14967536 ECH
Pvu5g1104 5 31383804 31387774 Pvu11g1162 11 14963453 14967536 PCT