Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0996 ATGGCGTCTCAACAGTTGACTCGCAGAGAAAACGCCACCACCGAGAAACGGGTTCACCTTCAGAAGGACACGGTTCCCAAAATGGCTACCCAGTTTGAGAACCTTGCAGGGAAAGCTAATGAATCAGATATCACTCGTGGGAAAGAGCCTCCGCAAGCGTTACAAGGTGGAGATCAGGTCAAAAGGCATGCAGGGAAAGCCGCTGGTGACGTTGGTGGACGTGGGAGAGACAGAGAGACTCAAGAGTCCCTATCTGACAAAGTGAATGATGAGGGTCACAAAGAGAAGGTAAGGGACCATGAGCCAAATGTAGTTGGAAACGAAGGGAGAGAAGGTGATGGCGGTGTTCGTGCTGTTGGGAAGTTCGAAATGAAAACTGAAGGGGGAGAAAGAGGGAACAAGGATAGAGAAGAACTGGAACCACGAACCAGAAAGGTTAAAGGAAGAACACAAAGAGGAAGAGAAAGTGAAGGACAAGTAGTGGCAGAGAAAGGAAGAGGAGGAAAACTTGGTGCTGAAAATGAAGGTGCTAGTGCAACCGCGACGATATCTTGTACGTTGGAAAAAGGTGACAGTAATACTCAGAAACCAAGAGAAGAGAGTGAAAGTGAAAAATCTACTTTGGAACAGGTTTTAACCAACACAGATAACGCTTGTAACGACCTGAAGAAGAGGTACGAGAGAACGAAGCAAGCAGCGAGTGAGACGCTGAACAGCACAGCACAAATCGCAACACAAGCGAAGGACGCAGCGGTTGAGAGGGGTCAACAAGGCTATGCTGTAACCAAAGACACCATTTCAAGCGCCGCAAAAACCGCTTCGGAAAAAACTGCGCCGGTGGCAGAGAAGACCAAAGGGTACACACTTCAAGTGGCGGAGAAGGCCAAGAGTGCGGGTGGCACGACAGCGAGTTACGTCGGAGAGAAAGCGGGCCAAGCGAAGGACGTTGCCGTGGAAGGTGGGAAGAGTGCGGCCGGATACGCTTCGAAGGTGGCTGCAGATTTGAAGGACAGGGCGACGGTGGTGGGGTGGACGGCGGCCAATTTTTCGACGGAGAAGACGGTGGAAGGGACGAAGATCGCGGCCCATTTGGTTGAGGGGGCGGCGGGGTATGCGGGACAAAAGGCCGCTGAACTTGCTTCAATGTCGGTAGGTGCTGTCAAAGGTTTGGCTGCTTCAGCTGGTGAGTCTGCTAAGGGATACACTGCAAGAAAGAAAGAAGAAGCGCAGAGGGAATTGGAGGCCAAAAGAGCATCTCAATCTCAGATAGCTGAAGAGACGCAATCGGAAGGAATTGGCGAAACTGTGAGCCAGCATGCCGAAAAACCGAAGACAGGTGGGGAAAGCTCTCAGCAGGAGGGAAGTGGAAGCGCTCCGTTGACAGCAATAGGCGAAACCGTGAGCAATGTTGGGGCGAAAGTGAAGAAACCATTTGTGAATCTTATGGGATCAGGAGAAGGGACCGAAGAAGAAAGCGGGAATGAGAGAAGTGGAGGGCATGAACAAGGAAAGGGTATGAGTGGTCAAACATTGAAAAGCGTTAGTGAGAAGTTGGGTGATGCCAACATCACTGATAACATCACCTAG 1587 0.5085 MASQQLTRRENATTEKRVHLQKDTVPKMATQFENLAGKANESDITRGKEPPQALQGGDQVKRHAGKAAGDVGGRGRDRETQESLSDKVNDEGHKEKVRDHEPNVVGNEGREGDGGVRAVGKFEMKTEGGERGNKDREELEPRTRKVKGRTQRGRESEGQVVAEKGRGGKLGAENEGASATATISCTLEKGDSNTQKPREESESEKSTLEQVLTNTDNACNDLKKRYERTKQAASETLNSTAQIATQAKDAAVERGQQGYAVTKDTISSAAKTASEKTAPVAEKTKGYTLQVAEKAKSAGGTTASYVGEKAGQAKDVAVEGGKSAAGYASKVAADLKDRATVVGWTAANFSTEKTVEGTKIAAHLVEGAAGYAGQKAAELASMSVGAVKGLAASAGESAKGYTARKKEEAQRELEAKRASQSQIAEETQSEGIGETVSQHAEKPKTGGESSQQEGSGSAPLTAIGETVSNVGAKVKKPFVNLMGSGEGTEEESGNERSGGHEQGKGMSGQTLKSVSEKLGDANITDNIT* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0996 528 MobiDBLite consensus disorder prediction 177 191 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 420 435 - -
Pvu5g0996 528 Coils Coil 406 426 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 395 528 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 1 220 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 503 528 - -
Pvu5g0996 528 Coils Coil 212 232 - -
Pvu5g0996 528 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 1 499 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 192 206 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 442 464 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 114 162 - -
Pvu5g0996 528 PANTHER - 1 499 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 63 107 - -
Pvu5g0996 528 MobiDBLite consensus disorder prediction 400 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0996 Pvu-Chr5 28686850 28689085 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0996 - - gmx:547879 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0996 5 28686850 28689085 Pvu11g1404 11 30937640 30939302 PCT