Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1404 ATGGCATCTCAGCAAATGCCTCGCAGAGACCCCAGCAAGAAGGTTAAAGAGAGAGAGGATCACGCTGAGGCAGATGGAAAGAAGTCATTTGGTGAGAAGGGGAGGGGTCAGAGAGAGTTGGATGGAGGTGAAGAAGGAAGAGCAAGAGAGAGTGGTAGGAGTGTTAATCATGTGGGGAAATTTGAAACAGAAGGTGAAGAGAAGGGTCCGGTTGAAAAAGAAGAACTCGAGAGAAGAGCAAGACAGGTAGAGGGAGAAGAGTGGAGCAAAGAGGATAAACAAAGAAATATTCCAAGAGGAAAAGTAAAAGCAGAGAAAGCAAGACTAGAAGCTAAAGGAATAGAAAAAGCTGAAACCAAAGAGGGTGGTGGTGAGGAACAAGGAAGAGGAAGAGAACAAAATGAACAGCCTAGCCTGGAAGATATTTCCAAGTACAGAGCCGAAGCTCAACAAAAAGCAATGAATGTAATTGAAGCTGCTAAGGAGAGGTATGAAAGAGAGGGAAAAAAACAAGCTGAAATTGAAGCTGCCAAAGAGAGAAACAATCAGGGAAATGAAGAGGAGACACAGGCAAAAGAAGTCACAAGAGAGAAGAAGGGTCAAGAAGGAAATCTTGAAGAAGGAGTTAAGGGCCAGAAGGCTTCTGGTGAAGCAAAGGACAGGACTGGTACAGTGGACCTCACTACACCACCTGATGAGAAGGCCAGATCTGGTGGTGGCATGAATGCTCAGAATGTTGGAGAGGAAGCTGCACAAGATAAAGATGTCCCAGTGGAAACTGGCAAGAGTGCTTCCGAAGTGGCTGCGGATTTGAGGGACAATGCTATACTGACAGGTTGGAGTGCTGCTCTTTACTCTACTGAGATTACTGTGGAGGGAACCAAGGCTGCCACTAATGCAGTTGAGGAAGCAGTTGAGTATTTAGGCCACAAGGCTTATGAGCTTGCTGCCAACTCACTGGATACTGCTACGGGTTTAGCTGCTGCAACTGGTGAGAAGGCCAAGGAGTACACTGCAAGGAAGAAAGAGGAGGCAGAGCGGGCTCTGGAGGCCAAAAAAGAAGCTCAGAATCAGGTGGTTGGGGAAAGGGAACAGAAACCATTTGGAAGCATCATTGGAGAAACACTAGGCAGTGCTGCACAGACAATGAAGAAGCCATTGGATAAAGCCACTGAGGGAGGGAGGGAGGCGTTGGGAGCAGTTGGTGAAACTGTGAAGGAGATTGGAGAGAGCATGGTGAAACCAGTAAAGAATGTGCATCAACATCAAAGTGAAGGGGGAGAGGGAGGGGTGTTGAATGCCATAGGTGAAACCATATCAGAAATAGCAGAGACAACTAGAATGATGGTTGCAGGAGAGGGAGAAAAGGAAAAACCAAAATCACATGAATATGAACATGCAGACTTGAAGCGTGATTAA 1419 0.4651 MASQQMPRRDPSKKVKEREDHAEADGKKSFGEKGRGQRELDGGEEGRARESGRSVNHVGKFETEGEEKGPVEKEELERRARQVEGEEWSKEDKQRNIPRGKVKAEKARLEAKGIEKAETKEGGGEEQGRGREQNEQPSLEDISKYRAEAQQKAMNVIEAAKERYEREGKKQAEIEAAKERNNQGNEEETQAKEVTREKKGQEGNLEEGVKGQKASGEAKDRTGTVDLTTPPDEKARSGGGMNAQNVGEEAAQDKDVPVETGKSASEVAADLRDNAILTGWSAALYSTEITVEGTKAATNAVEEAVEYLGHKAYELAANSLDTATGLAAATGEKAKEYTARKKEEAERALEAKKEAQNQVVGEREQKPFGSIIGETLGSAAQTMKKPLDKATEGGREALGAVGETVKEIGESMVKPVKNVHQHQSEGGEGGVLNAIGETISEIAETTRMMVAGEGEKEKPKSHEYEHADLKRD* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1404 472 Coils Coil 73 93 - -
Pvu11g1404 472 PANTHER - 215 466 - -
Pvu11g1404 472 PANTHER - 1 220 - -
Pvu11g1404 472 MobiDBLite consensus disorder prediction 1 147 - -
Pvu11g1404 472 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 1 220 - -
Pvu11g1404 472 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 215 466 - -
Pvu11g1404 472 MobiDBLite consensus disorder prediction 162 263 - -
Pvu11g1404 472 MobiDBLite consensus disorder prediction 450 472 - -
Pvu11g1404 472 MobiDBLite consensus disorder prediction 162 220 - -
Pvu11g1404 472 MobiDBLite consensus disorder prediction 9 147 - -
Pvu11g1404 472 Coils Coil 334 365 - -
Pvu11g1404 472 Coils Coil 147 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1404 Pvu-Chr11 30937640 30939302 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1404 - - pvu:PHAVU_011G135600g 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0996 5 28686850 28689085 Pvu11g1404 11 30937640 30939302 PCT