Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0995 ATGGGTTTCTTGTTCCCAACCCTCTTGTTGTGGTTGTGTCTCTTTGTTGTGTTAATTTTCTTCCAAACAAAAGCTGAGGAATTTGACCCCTACTTCAATGCCAATGTTTCCAGTTTGAGCAGTGGCAGAAAACTTGCAGGAAGATGCAACTTGTTCCGTGGAAAATGGGTGTATGACTCTTCATACCCTCTCTACGACCCTTCTACATGTCCCTTCATAGATCCACAATTCAACTGCCAAAAGTACGGTCGCCCTGACACACAGTATCAGAAATATAGATGGCAACCCTTCTCTTGTCCTTTACCAAGGTTCAACGCATTTGACTTTCTGAGTAAGTATAGAGGCAAGAAGATTATGTTTGTCGGTGACTCCTTGAGCTTAAACCAGTTCAACTCTCTGGCTTGTATGATTCACTCTTTTGTACCTAACACCAGAACCACTTTCACAAAGCAAGAAGCTCTCTCCAAAATCACATTTGAGGACTATGGCCTTGAGTTGTTTCTGTATCGCACAGCATACTTGGTGGACCTTGACCGTGAGAGCGTTGGAAGGGTTCTGAAGATTGACTCAATCAAGAGCGGTGACGCTTGGAGAGGAATGGACGTGCTGGTTTTCAACACGTGGCATTGGTGGACCCACACCGGGAGTTCACAGCCGTGGGACTATGTTCAAGAGAGTAACAAGCTGTACAAAGACATGAACCGTTTCATTTTATTCTACAAAGGTTTGACAACTTGGGCTAGATGGGTTAACATCAACGTGAATCCAGCCCAGACCAAAGTCTTCTTTCTGGGAATTTCTCCTGTGCATTATGAAGGGAAAGATTGGAACCAACCAGCAAGATCTTGCATGAGTGAGAGAGAACCATTCTTTGGTTTGAAGTACCCTGCAGGGACACCAATGGCTTGGGTGATAGTGAACAAGGTTTTGAGTAGGATAAAGAAGCCAGTGTATTTTCTGGATGTGACTACACTCTCACAGTACAGGAAAGATGCGCATCCTGAAGGGTACAGTGGGATTATGGCAACTGATTGCAGCCATTGGTGTCTTCCAGGACTGCCTGATACTTGGAATGTGCTTCTGCATGCTGCTCTCTTTGGCTGA 1104 0.4493 MGFLFPTLLLWLCLFVVLIFFQTKAEEFDPYFNANVSSLSSGRKLAGRCNLFRGKWVYDSSYPLYDPSTCPFIDPQFNCQKYGRPDTQYQKYRWQPFSCPLPRFNAFDFLSKYRGKKIMFVGDSLSLNQFNSLACMIHSFVPNTRTTFTKQEALSKITFEDYGLELFLYRTAYLVDLDRESVGRVLKIDSIKSGDAWRGMDVLVFNTWHWWTHTGSSQPWDYVQESNKLYKDMNRFILFYKGLTTWARWVNINVNPAQTKVFFLGISPVHYEGKDWNQPARSCMSEREPFFGLKYPAGTPMAWVIVNKVLSRIKKPVYFLDVTTLSQYRKDAHPEGYSGIMATDCSHWCLPGLPDTWNVLLHAALFG* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0995 367 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 365 IPR029962 GO:0016413
Pvu5g0995 367 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 101 363 IPR026057 GO:0016740
Pvu5g0995 367 Pfam PMR5 N terminal Domain 48 99 IPR025846 -
Pvu5g0995 367 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0995 Pvu-Chr5 28673674 28677376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0995 - - gmx:100797993 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0995 5 28673674 28677376 Pvu5g0995 5 28673674 28677376 ECH
Pvu5g0995 5 28673674 28677376 Pvu11g1393 11 30736445 30739104 PCT