Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1393 ATGGGTCTGTCATTAGTACATGCTCTGTTCTTAACTCTGTTTTTGCTCTGCCACCAAACAAAAGCAGAGGAGTCTGGTGCAACCAGGATGCTCGCAGCAGAATGCAACTTGTTTCGAGGGAAATGGGTCTACGATGCTTCATACCCTCTCTATGACCCTTCTTCTTGTCCCTTCATAGATCCACAGTTCAATTGCCAAAAGCATGGTCGCTCTGATAAACTTTACCAAAACTATAGGTGGACGCCATTTTCTTGTCCCTTGCCAAGGTTCAATGGATTGGAGTTTTTGGAGAGATATAGAGGGAAGAAGATTATGTTTGTTGGTGACTCCTTGAGCTTGAACCAGTTCAATTCATTGGCATGTATGGTTCATGCTTGGGTGCCAAAATCTAGGAGCACTTTCAGTCAAAGGGATGCTCTTTCCAAAGTGGCATTTGAGGACTATGGGCTTGAGATATACTTGTACAGAACAGCATATTTGGTGGATCTTGACCGTGAGAAAGTTGGACGAGTTTTGAAGCTCGACTCTATCAAGAACGGTGACTCGTGGATGGGGATGGACGTGCTGATCTTCAACACGTGGCACTGGTGGACCCACACCGGAAGTGCACAACCGTACGATCATTCATTTTCTCACTGTCTCACTGCA 648 0.4552 MGLSLVHALFLTLFLLCHQTKAEESGATRMLAAECNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKHGRSDKLYQNYRWTPFSCPLPRFNGLEFLERYRGKKIMFVGDSLSLNQFNSLACMVHAWVPKSRSTFSQRDALSKVAFEDYGLEIYLYRTAYLVDLDREKVGRVLKLDSIKNGDSWMGMDVLIFNTWHWWTHTGSAQPYDHSFSHCLTA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1393 216 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 4 208 IPR029962 GO:0016413
Pvu11g1393 216 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 4 208 - -
Pvu11g1393 216 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 87 202 IPR026057 GO:0016740
Pvu11g1393 216 Pfam PMR5 N terminal Domain 34 85 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1393 Pvu-Chr11 30736445 30739104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1393 - - pvu:PHAVU_011G1346001 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1393 11 30736445 30739104 Pvu11g1393 11 30736445 30739104 ECH
Pvu5g0995 5 28673674 28677376 Pvu11g1393 11 30736445 30739104 PCT