Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0950 ATGCGAATGCGCTACGTTCGAAATCTAAGCACCGGGTTCCGTTCACGTTCAGCCACCAAAGGCGCCACTTCCAAACCTCAACCTTCATCTTCTTCTTCAAACTCGTTATGCCTTTCGGAACTTCAAGAAGATTTCACGCTCTCAAGCCTCAAGCTTAAGCGACTCTCTGATTCAGATGATTCGGCTAGCGGGGTGTTTAAGCATATTTCTTCTATTTTCCATGCTGGTAAGCCAGTCAAGCAACCTGATTCTGAGAAAATTGATGGTGCAAAGGAATTTGAAAGAGTGCCAAATCTATCGTGGTTGTCGAGCATCTCTCAGAACAATATATTATTGCAACGGAAAGAGCAATCTCATAAAAAGAAACAAAAATATGTTTTCGAAGTCACTCAAGAAAACCGTTTTCAGAAGTTAGTTGAAGTCTGTGGAAAAATGCTAGGACCAGAGGCTACCCTTGAATTGTTTGGTAAACTGGGACGAGAAACAGACGTGAAAGGGTACAATGCATTGGTAGAAATGTGCATAGATAAAGCCAGGCAAACTGATGATGAAGACATCCCAATAGAGCTGGAAAATTATTTGTTGGCTCTTTGTGAAAGTGAACGGACAGAGGAGATTTTGAAGCTGTTGGAAATCATAGACATCAAAAACCTTTCCTCTGTTGAATCTGTAGCAGTTGTATTTCAGGCATTAGGAAGACTAATACTGGAACCTCTGGCAGAGAAGTTCCTTTTTTACTTCAAAAATAGTGATCATGAAGCACATAATATTACAAACTTCATTGCTTGTTATGCTGTTAGCATTCCAAATTTATCGGTTGAGGATGTCATAAAGAAGTTCAAAGATTTGCACCAAAGACTAGAAGTTTCACCTTCATCCTCATCATATCAGAAGATCATTTTACATAGCTGTGCATTGCACAAGGTGCATGTAGCACTTGATATTGTCAAAGAAATGTGTGAAGCAGGCCTAACTCTATCAACTGACGTGTTACACTCGATATTACAAATTTGTGACGAAACATCTGAATATAATTTGGTCCATCAAATCTTCTTTACCATATGTCGCTACAATTTGGAATCAAATGATGAAACATTCAGATCTATGATAAACTTGTTCTTGAAGATGAAAGATGTTGAAGGTGCGTATAAGATGCTTGATGATTTAGAGGAATTAAATTTGAAGCCAACAACTTGGATGTACAAATGTTTTCGAGAGGTGTTGTTCTGGTTACTGAGGATGTCTCTATTTCTACTCTTGTATACTTTTAACTGTCTCTTTAATGAGTTTGGAATGGTTTGCTAG 1305 0.3831 MRMRYVRNLSTGFRSRSATKGATSKPQPSSSSSNSLCLSELQEDFTLSSLKLKRLSDSDDSASGVFKHISSIFHAGKPVKQPDSEKIDGAKEFERVPNLSWLSSISQNNILLQRKEQSHKKKQKYVFEVTQENRFQKLVEVCGKMLGPEATLELFGKLGRETDVKGYNALVEMCIDKARQTDDEDIPIELENYLLALCESERTEEILKLLEIIDIKNLSSVESVAVVFQALGRLILEPLAEKFLFYFKNSDHEAHNITNFIACYAVSIPNLSVEDVIKKFKDLHQRLEVSPSSSSYQKIILHSCALHKVHVALDIVKEMCEAGLTLSTDVLHSILQICDETSEYNLVHQIFFTICRYNLESNDETFRSMINLFLKMKDVEGAYKMLDDLEELNLKPTTWMYKCFREVLFWLLRMSLFLLLYTFNCLFNEFGMVC* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0950 434 Gene3D Tetratricopeptide repeat domain 130 415 IPR011990 GO:0005515
Pvu5g0950 434 MobiDBLite consensus disorder prediction 1 35 - -
Pvu5g0950 434 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Pvu5g0950 434 Pfam Pentacotripeptide-repeat region of PRORP 298 398 IPR033443 -
Pvu5g0950 434 TIGRFAM PPR: pentatricopeptide repeat domain 365 397 IPR002885 -
Pvu5g0950 434 PANTHER OS02G0132600 PROTEIN 191 402 - -
Pvu5g0950 434 PANTHER OS02G0132600 PROTEIN 65 187 - -
Pvu5g0950 434 MobiDBLite consensus disorder prediction 10 35 - -
Pvu5g0950 434 PANTHER OS02G0132600 PROTEIN 191 402 - -
Pvu5g0950 434 PANTHER OS02G0132600 PROTEIN 65 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0950 Pvu-Chr5 26331151 26337997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0950 - - pvu:PHAVU_005G091800g 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0950 5 26331151 26337997 Pvu5g0950 5 26331151 26337997 ECH
Pvu5g0950 5 26331151 26337997 Pvu11g1453 11 33422514 33430367 PCT