Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1453 GTGGGAGATGCTCTAGATATTGTTGAACAAATGTGTAATGCTGGCTTTTACTTGTCAACTGACGTGTTACAATTCATATTACAAATCTGTGAGGAATCTTATGAATACATTTTGGTGCATCGAATCCATTCCATAATATGTCGCTATCAGTTGAAGTTGAATGGTGAAATAGGCAGGTGCTTGGTACACTTTTGTGTGAGGATAAAAGATTTTGAAGGCGCATACAAAATAATTGGTGACTTAGAGGAAATGAATTTCAAACCTACGACAAACATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAGAACATCAGTGGTGGGTTGAGGGTCCTCAAGCACATGCAAGGTGCCAATGTAAAGCCTGATTCTCAGACTTTCTGCTATTTGATTCACAATTGTGAAACAGAAGAGGATATAATGCAGGTACATTCAGCTTAA 444 0.3784 VGDALDIVEQMCNAGFYLSTDVLQFILQICEESYEYILVHRIHSIICRYQLKLNGEIGRCLVHFCVRIKDFEGAYKIIGDLEEMNFKPTTNMYNAIMAGYFREKNISGGLRVLKHMQGANVKPDSQTFCYLIHNCETEEDIMQVHSA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1453 147 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 89 123 IPR002885 -
Pvu11g1453 147 Pfam PPR repeat family 88 135 IPR002885 -
Pvu11g1453 147 PANTHER OS02G0132600 PROTEIN 2 145 - -
Pvu11g1453 147 TIGRFAM PPR: pentatricopeptide repeat domain 92 125 IPR002885 -
Pvu11g1453 147 Gene3D Tetratricopeptide repeat domain 1 147 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1453 Pvu-Chr11 33422514 33430367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1453 - - pvu:PHAVU_011G1400000 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0950 5 26331151 26337997 Pvu11g1453 11 33422514 33430367 PCT