Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0930 ATGTCCCTTCCATCTTCAACTCTTGCATCTGAACTTAGGCGACCTTGCGTGAGTTATGCTCCAAACATATGGGGAGACACTTTCCTTCAGTATGCTGCTCAATCCAAGGAAACCGATGACAAGGTAAAGCAGCAAGCAGAAAAACTAAAAGAGGAGGTGAAATCAATATTTCAATCATCAATGAATCAAAACATCGTACAAAAATTAAACTTAAACTTCATTGACTCAGTCCAACGTTTAGGCGTGTCATATCACTTTCAACAAGAAATTAATCAAGAGTTGGAACAAATTTACAACACTTACACAAAAAATACCTCTATCAATGAAGATGGTGATTATCACTTTTTTGCTCTACTCTTTCGTTTGTTAAGGCAACAAGGTTATGGAATTTCATCAGATGTGTTTCACAAATTTAAAAATGGCCAAGGAAACTTCAATGAAACACTTGCCAACGATGTTCAAGGCTTGTGTAGTTTGTATGAAGCTTCACATCTAAGAATTCCTGGAGATGATGTGTTGGAAGAAGCATGTGACTTCTCAAATACTAAACTTAAGTCCTTGGCAAAACAACTAAGTCCATCTCTTGTTGCACAAATCAATCATTGCTTAAGGCGACCTCTTAACAAGAGTGTACCTTGGTTTGAGACAAAACATTACATGACTCTCTTTGAACAAGATCCTTCCCATAACGAAACTATATTGATATTTGCAAAAGTAGAATTCAACCTTCTTCAAAAGTTGCATAAAAAAGAAATAGGTCGTATCACTGAGTGGAAGAAAAATTCAAACTATGTGACTCGGGTCCCTTACGCAAGAGATAGGTCGGTTGAGAGCTATCTTTGGTCATTGGCAATATCCTACAAGCCTGAATACAGCAATGCAAGAACGTTTGTGGGAAAATTGATCCAATGTATCAGTCTTCTAGATGATACATATGATGCTTATGGCACATTTGAAGAACTTGAAGTCTTCACAAAAGCAATTCAGAGATGGGATATTAGCCACATTCGATCTCTTCCTCAGGGTATGAAAGTAGTATTTGAAACAGTTCTACAACTGTGTGAAGAAATAGAGTTGCTGACAAGAGAGAATGGAAAATCAAGTTTTGTGGTGCCACGTTTTAAACAAGCCGTTTTTAACTTAACAAAAGGCTACATGGTTGAAGCAAAATGGTGTCATGAGGATTACATTCCAACATATGATGAGTATAAAGCAAATGGAGTCTTAACTTCTTGTTACCCTTGTATGATAACTTCGTTTATTAGCCTGATAGAAGTTGCAACAGAAAGTGTGGTGGATTGGATTTTCAGTGATCCAAGTATCCTTGCAGCTGCATCAGTTATTGGGAGAGTAATGGATGACATGGCCTCACACAAGTTTGAGCAAGAAAGAGTACATGTTGCATCAGCTGTGGAATGTTGCATGAAGCAATATAGCATTTCACAAGCAGAGGCTTATAACTTGATTCACAAGGATGTTGAAGATTGTTGGAAGGTTATACATGAAGAATATATGAAGTCAAGTAATATTCCAAAGTGTGTGCTGGATTGTATAGTTAATTTGGCAGGTATGTCTGAGGTTTCTTATGAAAATTATAAGGATAAATATACTAATGGAGAATGGCTAAAAGATTGTGTTTCTTCATTGCTTGTGGATCCCGTGTCCATCGATCAGGAGAAGTTATCTGCCATATAA 1695 0.3699 MSLPSSTLASELRRPCVSYAPNIWGDTFLQYAAQSKETDDKVKQQAEKLKEEVKSIFQSSMNQNIVQKLNLNFIDSVQRLGVSYHFQQEINQELEQIYNTYTKNTSINEDGDYHFFALLFRLLRQQGYGISSDVFHKFKNGQGNFNETLANDVQGLCSLYEASHLRIPGDDVLEEACDFSNTKLKSLAKQLSPSLVAQINHCLRRPLNKSVPWFETKHYMTLFEQDPSHNETILIFAKVEFNLLQKLHKKEIGRITEWKKNSNYVTRVPYARDRSVESYLWSLAISYKPEYSNARTFVGKLIQCISLLDDTYDAYGTFEELEVFTKAIQRWDISHIRSLPQGMKVVFETVLQLCEEIELLTRENGKSSFVVPRFKQAVFNLTKGYMVEAKWCHEDYIPTYDEYKANGVLTSCYPCMITSFISLIEVATESVVDWIFSDPSILAAASVIGRVMDDMASHKFEQERVHVASAVECCMKQYSISQAEAYNLIHKDVEDCWKVIHEEYMKSSNIPKCVLDCIVNLAGMSEVSYENYKDKYTNGEWLKDCVSSLLVDPVSIDQEKLSAI* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0930 564 PANTHER OS04G0344100 PROTEIN-RELATED 9 554 - -
Pvu5g0930 564 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 9 554 - -
Pvu5g0930 564 SUPERFAMILY Terpenoid synthases 229 556 IPR008949 -
Pvu5g0930 564 Gene3D - 63 229 IPR036965 GO:0010333|GO:0016829
Pvu5g0930 564 Pfam Terpene synthase, N-terminal domain 23 203 IPR001906 GO:0010333|GO:0016829
Pvu5g0930 564 SFLD Isoprenoid Synthase Type I 229 555 - -
Pvu5g0930 564 Pfam Terpene synthase family, metal binding domain 234 498 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pvu5g0930 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 21 229 IPR008930 -
Pvu5g0930 564 CDD Terpene_cyclase_plant_C1 14 553 IPR044814 GO:0010333|GO:0016102
Pvu5g0930 564 Coils Coil 32 52 - -
Pvu5g0930 564 Gene3D Farnesyl Diphosphate Synthase 21 539 IPR008949 -
Pvu5g0930 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 229 555 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0930 Pvu-Chr5 25570657 25573726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0930 K15803 - gmx:100781367 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0930 5 25570657 25573726 Pvu5g0930 5 25570657 25573726 ECH
Pvu5g0930 5 25570657 25573726 Pvu11g1480 11 34433544 34437981 PCT