Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0928 ATGGCCACCACTCTGCCCTCCAACTTCGACGACCTCCGCTCGCCGATGCTGCTGGCGGCGGCCAAGAAACCAGCGGCGGAGAAGCTCTGCATCGACGACATGCTGCAGAAGTACTGCGGTGAGTTCGGGCGGTGGCAGCTCAAACACTTCATCCTCACCAGCCTCGCCTGGGCGCTCGAGGCCTTCCACACCATGGTCATGATCTTCGCCGACCGCGAACCAGACTGGAGGTGCGTCCCCGGCGCCGACTGTAACAGCGGAGGGGATGGCGGCGTCTGCGGTCTTTCGCCGGAGGCGTGGGAGTGGGCCGGCGGCCGCCACGGCTCCACCGTATCGGAATGGAATCTGATTTGTGGTGATAAGTTCAAGGTTGGGTTGGTTCAGGCCGTGTTCTTCGCTGGATGCATGATTGGTGCTGGAATTTTTGGCCACCTCTCAGACTCCTCTCTAGGAAGAAAAGGCTCTCTCACAGTGGTTTGCGCCCTTAACACTCTCTTTGGCTGCTTAACAGCACTGTCCCCTAACTACTGGATCTACGCCCTCCTCCGCCTCCTCACCGGCTTCAGCAGCGGCGGCGTTGGCCTCACTGCCTTCGTCCTCGCCACCGAACCGATTGGCCCGACGAAGCGCGGCACGGCGGGCATGTCCACCTTCTACTTCTTCTCTGGCGGCATTGCAGTTCTCTCTGGCATCGCTTACATCTTTCAATCATGGCGCTATCTCTACATAGCTTCCTCCATCCCCTCCTTCCTCTACATCATCCTTGTCCTACCCTTTATCTCCGAATCCCCAAGATGGTTCCTTGTTCGCGGGAAAGTATCCGAAGCCACGAAGCTCATGTCCACCATTGCTTCTTCCAACGGGAAGCACCTTCCCGATGGTGTTTTCCTCGCTCTCGACGATGAAGCATCGTCAACAAAAATCCAAGGTTCAGGTCATGACATAACACTGATGACATACAAAAACGAAAGCATGGAAAACAAAGACGCGCTGGTGGGATCCATCGTAGACGTCATTCGTTCTCCCATCACCCGTGTAAGGTTGTTCTTAGCGGTGGCTCTTAACTTCTTAGGCTCTGTTGTGTACTACGGGCTTAGTTTAAACGTCATGAATCTCGAAACCAACCTTTACCTGAATGTGATATTGAACTCCGTGGCGGAGATGCCGGCGTTTACAATAACGGCGGTGTTTTTGGACAGGTTTGGACGGAAGCCATTAACGGTGGCGACAATGTGGTTTAGCGGGTTGTTTTGTTTGATGGGGAGTTTGACTGGCAACATTGGGGTGTGGAAGGTGGTGAGAATGGTGTGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAATTTGTTGTTTATTTATACGGCGGAGCTGTTTCCAACAGTGGTGAGGAACGCAGCGCTTGGATGCACCACGCAAGCTGCGCAAATGGGAGCAATATTGGCGCCGTTTGTGGTGGTTTTGGGTGGGTGGCTGCCGTTTGCGGCGTTTGCAGCATGTGGAATAGTGGGAGGAATGTTTGCGTTTTATCTTCCAGAGACGATGAATCAACCTCTGTACGATACATTCAATGGAATGGAAGCAGGACTTGCTTGA 1599 0.5397 MATTLPSNFDDLRSPMLLAAAKKPAAEKLCIDDMLQKYCGEFGRWQLKHFILTSLAWALEAFHTMVMIFADREPDWRCVPGADCNSGGDGGVCGLSPEAWEWAGGRHGSTVSEWNLICGDKFKVGLVQAVFFAGCMIGAGIFGHLSDSSLGRKGSLTVVCALNTLFGCLTALSPNYWIYALLRLLTGFSSGGVGLTAFVLATEPIGPTKRGTAGMSTFYFFSGGIAVLSGIAYIFQSWRYLYIASSIPSFLYIILVLPFISESPRWFLVRGKVSEATKLMSTIASSNGKHLPDGVFLALDDEASSTKIQGSGHDITLMTYKNESMENKDALVGSIVDVIRSPITRVRLFLAVALNFLGSVVYYGLSLNVMNLETNLYLNVILNSVAEMPAFTITAVFLDRFGRKPLTVATMWFSGLFCLMGSLTGNIGVWKVVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPFVVVLGGWLPFAAFAACGIVGGMFAFYLPETMNQPLYDTFNGMEAGLA* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0928 532 SUPERFAMILY MFS general substrate transporter 120 520 IPR036259 -
Pvu5g0928 532 ProSitePatterns Sugar transport proteins signature 1. 394 410 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu5g0928 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 31 530 - -
Pvu5g0928 532 Pfam Sugar (and other) transporter 121 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu5g0928 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 517 IPR020846 GO:0022857
Pvu5g0928 532 ProSitePatterns Sugar transport proteins signature 2. 185 210 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu5g0928 532 Gene3D MFS general substrate transporter like domains 84 524 IPR036259 -
Pvu5g0928 532 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 31 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0928 Pvu-Chr5 25154111 25158678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0928 1 528 Organic Solute Cotransporters AT3G20660 67.420 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0928 K08202 - gmx:100818415 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0928 5 25154111 25158678 Pvu5g0928 5 25154111 25158678 ECH
Pvu5g0928 5 25154111 25158678 Pvu11g1509 11 37450662 37454675 PCT