Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1509 ATGGCCACCAAGTCGCCCACTGATTCCAAAGATCAAGGCGCCGCGCCTCTCATTTGGGCGGAGGAGGAGCGCACCGGAGCTTCGTCTGAGAAGCTCTGCATCGACGAGATGCTGCAGAAGTATTGCGGCGAGTTTGGGCGGTGGCAGCTGAGGCACTTCGTTCTCACAAGTCTGGCTTGGGCCTTGGAAGCCTTCCACACGATGGTCATGATTTTCGCCGATCGCGAACCGGAGTGGCGGTGCCTCGACGGCGCGGCCGGTTCGGGGTGCAACCCAGCCGCGAAAAGCGTGTGCCGGTTCGAACCGGGTTCGTGGGAGTGGGTAGGGGACTCGACCGTTGTGGAGTGGGGGCTGTTTTGCGCGGACAAGTTTAAGGTCGGGCTGGTTCAGGCCGTCTTCTTCGGCGGCTGTATGATCGGTGCTGGAACATTCGGTCACCTCTCAGACTCAGTCCTCGGAAGAAAAGGGTCTCTCACAGTGGTTTGTGCCCTAAACACCATTTTTGGCACCTTGACAGCCTTCTCTCCCAACTACGCCTTCTACATCCTCTTCCGCTTCCTCACTGGTTGCAGCACCGGCGGCGTGGGCCTCTGCGCCTTTGTCCTCGCAACCGAGCCAGTGGGTCCCACAAACCGCGGCACCACCGGCATGTCCACCTTCTACTTCTTCTCCTCCGGCATCGCCATCTTATCTGCCATTGCCTACATCTTCTCCACGTGGCGAAAACTCTATATAGCCTCTTCCATCCCCTCCCTCCTCTTCCTCCTCTTCATCCTCCCCTTCATCTCAGAGTCCCCAAGATGGTACCTCGTTAGAGGAAGAAAATCCGAAGCAATGAAAGTCATCACTGCCATGGCTACTACCAACGGTAACCACATCCCAGAAGGAGTTTTTCTAACCCTAGACCATCAATCAGCACAATTTCCACCACCACTATCATCCTTATCATGCAACAGCCTTCAAGAACAGGTATTATCAGACGTCAACTCCTTAAACGAATCCCAAAATCTCGAGAAATTAGTCTCTGATTCTATCCTTCTAGGCTCAGCCAAGGGATCGGCATGCCAAGTGGCGGAGGCTGGTTCGCTTCTCGACGTGATTCGCTCTCCGATCACACGTTCGAGGTTGATCCTCGCCGTGGTCATCAATTTCCTGTGCTCCGTGGTGTACTACGGCTTGAGCCTCAACGTGGTCAACCTCGAAACCAACCTCTACCTCACCGTGATACTCAACGCCGTGGCGGAGATGCCGGCGTTCATGATAACGGCGTTGTTGCTGGACCGGTGGGGGAGGAAGCCGTTGACCATAGCGACGTTATGGTTCAGTGGGGCGTTCTGCTTTGCGGGGAGTTTGGTGAGAAACGTTGGGGTGTGGAAGGGTGTGAGAATGATGTGTGGGATTTTGGGAATTTTCGGAATGGCGGGCACCTATAATCTGCTGTTCATATACACAGCGGAGCTGTTCCCGACGGTGGTAAGGAACGCCGCGCTAGGGTGCGCCACGCAGGCGGCGCAGATGGGTGCGATACTGGCGCCGCTGGTCGTCGTTATGGGTGGGTCGTTTCCGTTTATTATTTTTGCTATATGCGGAATTAGTGGTGGATTTTTCGCGTTTTATCTGCCGGAAACACTGAACCAACCTCTCTATGATACGTTAGCGGGCATGCTGGCTAAGGAGAATAGTGTCACCTCTTCCATTGTATGA 1704 0.5493 MATKSPTDSKDQGAAPLIWAEEERTGASSEKLCIDEMLQKYCGEFGRWQLRHFVLTSLAWALEAFHTMVMIFADREPEWRCLDGAAGSGCNPAAKSVCRFEPGSWEWVGDSTVVEWGLFCADKFKVGLVQAVFFGGCMIGAGTFGHLSDSVLGRKGSLTVVCALNTIFGTLTAFSPNYAFYILFRFLTGCSTGGVGLCAFVLATEPVGPTNRGTTGMSTFYFFSSGIAILSAIAYIFSTWRKLYIASSIPSLLFLLFILPFISESPRWYLVRGRKSEAMKVITAMATTNGNHIPEGVFLTLDHQSAQFPPPLSSLSCNSLQEQVLSDVNSLNESQNLEKLVSDSILLGSAKGSACQVAEAGSLLDVIRSPITRSRLILAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITALLLDRWGRKPLTIATLWFSGAFCFAGSLVRNVGVWKGVRMMCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVMGGSFPFIIFAICGISGGFFAFYLPETLNQPLYDTLAGMLAKENSVTSSIV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1509 567 ProSiteProfiles Major facilitator superfamily (MFS) profile. 52 545 IPR020846 GO:0022857
Pvu11g1509 567 SUPERFAMILY MFS general substrate transporter 118 548 IPR036259 -
Pvu11g1509 567 Pfam Sugar (and other) transporter 387 549 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu11g1509 567 Pfam Sugar (and other) transporter 123 287 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu11g1509 567 ProSitePatterns Sugar transport proteins signature 1. 422 438 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g1509 567 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 34 313 - -
Pvu11g1509 567 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 352 558 - -
Pvu11g1509 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 352 558 - -
Pvu11g1509 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 34 313 - -
Pvu11g1509 567 Gene3D MFS general substrate transporter like domains 110 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1509 Pvu-Chr11 37450662 37454675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1509 23 561 Organic Solute Cotransporters AT3G20660 63.100 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1509 K08202 - gmx:100814182 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1509 11 37450662 37454675 Pvu11g1509 11 37450662 37454675 ECH
Pvu5g0928 5 25154111 25158678 Pvu11g1509 11 37450662 37454675 PCT