Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0256 ATGGTTGCAAACGACTATTTTCCTCCTTTGTTTAGTGTGGCCCCAATGATGGAGTGTACAGATCATCACTATAGGACTCTTGCACGTCTCTTGTCAAAGCACACTTGGCTCTACACGGAGATGCTTGCTGCCGAAACAATTGTTTATCAAAAGGGAAATCTGGACAGATTCTTGGCATATTCTCCAGATCAACATCCTATTGTGCTTCAAATTGGTGGAAGTAATTTAGATAATTTGGCAAAAGCAGCTGAACTGGCAAATGCTTATTGCTACGATGAGATCAACTTCAACTGTGGATGCCCAAGTCCTAGAGTAGCTGGACGTGGATGCTTTGGTGTACGTCTTATGCTTGATCCAAAGTTTGTTGCAGAGGCTATTTCATTAATTGCTGCCAATACAAATGTACCTGTTACTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCCTACAATGAATTGTGTGATTTCATTTACAAGGTTTCTTCCCTATCACCTGCTAAGCATTTCGTAATTCACTCAAGGAAGGCACTGCTTAAGGGCCTTAGCCCATCTGAAAATCGGAGTATTCCTCCACTGAAGTATGAATACTTTTATGGCCTCATACGGGACTTTCCTGACTTAACATTTACAATCAATGGTGGTATTACTAGTATTGATGAGGTCAATGGAGCTCTAAAGGCTGGGGCCCATGGTGTTATGGTTGGACGTGCAGCATACCATAACCCTTGGCATATTTTGGGACATGTTGATACTGCAATTTATGGTGCACCGGGTAGTGATCTTACACGTCGTCAGGTTCTCGAGAAATATCAAGTATATGGGGATTCGGTAGTACGACAATATGGACTTGGCCCAACTGTGAGAGATATTGTGAAGCCTTTACTTGGCTATTTCCATTCCGAGCCTGGGAATGGACTTTGGAAGCGCAAAGCAGATTCAGCTGTCCAAACTTGCACGACAATTAAATCATTTTTTGAAGAAACCCTTGTAGCAATTCCTGACTCAGTCTTGGATTCACCTGTTGCGGAACCACAATATGGTCGTGGAGATCTTTTTGCTAACATACACAACTTGCTACCTCCACCATACAGAACAAGAGAAGAGAATGCCATTTAA 1119 0.4227 MVANDYFPPLFSVAPMMECTDHHYRTLARLLSKHTWLYTEMLAAETIVYQKGNLDRFLAYSPDQHPIVLQIGGSNLDNLAKAAELANAYCYDEINFNCGCPSPRVAGRGCFGVRLMLDPKFVAEAISLIAANTNVPVTVKCRIGVDDHDSYNELCDFIYKVSSLSPAKHFVIHSRKALLKGLSPSENRSIPPLKYEYFYGLIRDFPDLTFTINGGITSIDEVNGALKAGAHGVMVGRAAYHNPWHILGHVDTAIYGAPGSDLTRRQVLEKYQVYGDSVVRQYGLGPTVRDIVKPLLGYFHSEPGNGLWKRKADSAVQTCTTIKSFFEETLVAIPDSVLDSPVAEPQYGRGDLFANIHNLLPPPYRTREENAI* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0256 372 Gene3D Aldolase class I 8 249 IPR013785 -
Pvu5g0256 372 PIRSF Dus 1 345 IPR001269 GO:0008033|GO:0017150|GO:0050660
Pvu5g0256 372 SUPERFAMILY FMN-linked oxidoreductases 11 311 - -
Pvu5g0256 372 Pfam Dihydrouridine synthase (Dus) 13 318 IPR035587 -
Pvu5g0256 372 Gene3D - 257 319 - -
Pvu5g0256 372 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 1 372 - -
Pvu5g0256 372 CDD DUS_like_FMN 11 244 IPR035587 -
Pvu5g0256 372 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 1 372 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0256 Pvu-Chr5 2222641 2232827 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0256 K05539 - gmx:100785422 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0101 11 726722 731085 Pvu5g0256 5 2222641 2232827 PCT