Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0101 ATGACGAAGCTTGCAGGATATTCCCTGGCTGTTTCATTTGCTCCCATAAGTTGCAACATCCTTAGAAACAATTGCAGATTCCCATTAGTTATATCTCGTAGGAATAAGTTCAGCTGTAGGTTATTTTCTACTCATGCTCTGAAAGCACAGTTACATGATAAGCCTGGAGCGGTTTCCAGATACTATCTTCCTCCTTGGTTTAGTGTTGCTCCTATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTTTACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACATCCCATCGTGCTTCAAATCGGAGGGAGTAATATAAAAAATTTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGCTATGACGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTTGCTGGGCATGGGTGTTTCGGTGTGAGTCTTATGCTTAACCCCAAGTTTGTTGCTGAGGCCATGTCAGCAATTGCTGCCAGCACAAATGTACCTGTCAGTGTCAAATGTCGAATTGGCGTGGATGATCATGATTCTTATAATGAGCTTTGTGATTTCATATACCAGGTTTCTTCTTTATCACCCACTAAGCATTTTATAATTCACTCAAGGAAGGCACTGCTCAATGGTATTAGCCCTGCTGAGAATAGGAGCATTCCTCCGCTAAAATATGAATACTTCTACGGCCTCCTACGTGACTTTCCTGACCTTACATTTACAATCAATGGCGGCATTACTAGTGTTGAAGAGGTCATTGCGTCTCAAGAAGCTGGGGCTCATGGTGTTATGGTTGGACGTGCAGCCTACAACAACCCTTGGCATATTTTGGGACACGTAGATTCTGCAATTTATGGTACACCAAGCAGTGGTCTTACACGTCGTCAGGTCCTTAAAAGATATCTGGCCTATGGGGAGTCGGTCATGGGAAAATATGGACGTAGGCCAACTATGCGAGATATTGTAAAGCCTTTACTCAATCTTTTCCATTCAGAACCTGGGAATGGACTCTGGAAGCGCAAAGCTGATGCTGCTTTCAAAAATTGCTCGACTGTGGAATCATTTTTTGAAGAAACCCTTGTGGCAATTCCTGACTCAGTATTGGATTCGCCTGTTACCAAACTACCACCTGGCCGTAGAGATCTTTTTGCAAACATACACAATTTATTGCCTCCGCCATACACAACAGGAGAAGAAGCAGTAGTCATTTGCGCTTAA 1296 0.4313 MTKLAGYSLAVSFAPISCNILRNNCRFPLVISRRNKFSCRLFSTHALKAQLHDKPGAVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIKNLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVSVKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEVIASQEAGAHGVMVGRAAYNNPWHILGHVDSAIYGTPSSGLTRRQVLKRYLAYGESVMGKYGRRPTMRDIVKPLLNLFHSEPGNGLWKRKADAAFKNCSTVESFFEETLVAIPDSVLDSPVTKLPPGRRDLFANIHNLLPPPYTTGEEAVVICA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0101 431 Gene3D - 315 380 - -
Pvu11g0101 431 CDD DUS_like_FMN 67 300 IPR035587 -
Pvu11g0101 431 Gene3D Aldolase class I 63 306 IPR013785 -
Pvu11g0101 431 Pfam Dihydrouridine synthase (Dus) 69 377 IPR035587 -
Pvu11g0101 431 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 58 428 - -
Pvu11g0101 431 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 58 428 IPR004653 GO:0002943|GO:0017150
Pvu11g0101 431 SUPERFAMILY FMN-linked oxidoreductases 66 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0101 Pvu-Chr11 726722 731085 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0101 K05539 - gmx:100779457 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0101 11 726722 731085 Pvu11g0101 11 726722 731085 ECH
Pvu11g0101 11 726722 731085 Pvu5g0256 5 2222641 2232827 PCT