Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0247 ATGGATTTGGCATCCAATCTCGGAGGCAAGATTGAGAAGACGGAAGTTCTCTCTGCCGTCGACAAGTATGAGAAGTATCATGTTTGCTACGGAGGTGAAGAGGAAGAGAGGAAAGCTAACTATACTGATATGGTGAATAAATACTATGATCTTGTTACCAGCTTTTATGAGTTTGGCTGGGGGGAATCTTTCCATTTTGCTCACAGATGGAATGGGGAATCTCTTCGGGAGAGCATCAAGCGACATGAACACTTCCTTGCTTTACAACTTCGACTGCAACCAGGGCAGAAGGTTTTGGATGTTGGATGTGGAATTGGGGGACCATTAAGAGAAATTTCTCGATTCAGCTCAACTTCAATTCTTGGGTTGAATAATAATGAGTACCAGATAACAAGAGGAAAGGAACTCAATCGCATTGTGGGACTGGACAAGACTTGCAATTTTATCAAGGCCGACTTCATGAAAATACCAATTGCAGACAACACTTTTGATGCAGTGTATGCGATTGAAGCCACTTGCCATGCTCCAGATGCTTATGGATGCTATAAAGAGATTTTTAGAGTGTTAAAGCCTGGTCAATATTTTGCTGCTTATGAATGGTGTATGACCGATAATTTTGATCCCCAAAATCCAGAGCACCAAAAAATCAAGGCACAAATTGAGATTGGTGATGGGCTTCCAGACATTAGATTGACCACTAAGTGTCTTGAAGCTCTGAAGCAAGCAGGTTTTGAGGTAATATCGGAGAAAGATCTAGCAGCTGACTCTCCTGTTCCATGGTACTTGCCTTTAGACAAAAGTCATTTCTCACTGAGTAGCTTCCGTCTAACTGCTGTTGGGCGACTTTTCACCAAAAACATGGTGAAGGTTCTGGAGTATGTTGGACTGGCTCCAAAGGGTAGTCTAAGGGTTCAAGATTTCCTAGAGAAGGCTGCGGAGGGACTAGTTGAAGGAGGAAAGAAAGAGATTTTCACACCAATGTACTTCTTCTTGGCACGGAAGCCTGTTTCAGACACTGATCCAGACAGTAACTAA 1035 0.428 MDLASNLGGKIEKTEVLSAVDKYEKYHVCYGGEEEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAHRWNGESLRESIKRHEHFLALQLRLQPGQKVLDVGCGIGGPLREISRFSSTSILGLNNNEYQITRGKELNRIVGLDKTCNFIKADFMKIPIADNTFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTDNFDPQNPEHQKIKAQIEIGDGLPDIRLTTKCLEALKQAGFEVISEKDLAADSPVPWYLPLDKSHFSLSSFRLTAVGRLFTKNMVKVLEYVGLAPKGSLRVQDFLEKAAEGLVEGGKKEIFTPMYFFLARKPVSDTDPDSN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0247 344 Pfam Methyltransferase domain 99 196 IPR013216 GO:0008168
Pvu5g0247 344 PANTHER ZGC:194242 1 337 - -
Pvu5g0247 344 CDD AdoMet_MTases 97 192 - -
Pvu5g0247 344 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
Pvu5g0247 344 Gene3D Vaccinia Virus protein VP39 20 277 IPR029063 -
Pvu5g0247 344 PANTHER CYCLOARTENOL-C-24-METHYLTRANSFERASE 1 337 - -
Pvu5g0247 344 Pfam Sterol methyltransferase C-terminal 272 335 IPR013705 GO:0006694|GO:0008168
Pvu5g0247 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0247 Pvu-Chr5 2137108 2142255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0247 89 249 Acyl Lipid Metabolism Gene Families AT3G18000 30.864 1.19e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0247 K00559 - gmx:548073 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0123 11 915192 918883 Pvu5g0247 5 2137108 2142255 PCT