Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0123 ATGAATTTGGCATCAGGTGTTGGTGGAAAGATTGAGAAATCTCAAATTTTGTCAGCGGTTGAGAAGTATGAGAAGTATCATGTTTGTTATGGAGGCCAAGAGGAAGAGAGAAAAGCTAATTACACTGATATGGTTAATAAATACTATGATCTTTCTACTAGCTTTTATGAGTTTGGCTGGGGGCAATCTTTCCATTTTGCACACAGATGGAAAGGGGAATCTCTTCAGGAGAGCATTAAAAGACATGAGCACTTCCTTGCTTTACAACTTGGCTTAAAGCCTGGACAAAAGGTCTTGGATGTTGGATGTGGAATTGGAGGGCCACTAAGAGAAATTTCTCGATTCAGCTCAACTTCAGTTACAGGACTGAACAACAATGAGTATCAGATAACAAGAGGAGAGGCACTCAATCGCATTGCTGGAGTGGACAGGACTTGCAACTTTGTCAAGGCTGATTTCATGAAAATGCCATTCACAGACAACAGTTTTGATGCAGTGTACGCAATTGAAGCTACATGCCATGCACCAGATGCTTATGGATGCTACAAAGAGATTTTTAGAGTGTTGAAGCCTGGCCAATATTTTGCTGCATATGAATGGTGCATGACTGAACAGTTTGATCCCAACAACGAAGAGCACCAAAAAATAAAGGCAGAAATTGAGATTGGTGATGGACTTCCTGACATTAGATTGACCACAAAATGTGCTGAAGCTCTGAAGCAAGCAGGTTTTGAGGTAATCTGGGAGAAAGACCTTGCAATTGATTCTCCTGTTCCTTGGTACTTTCCTCTGGATACAACTAACTTCTCACTCAATACCTTTCGTCTAACTGCTGTTGGACGATTTTTCACAAGAAGCTTGGTGAAGGGTCTAGAATTTGTAGGACTGGCTCCAAAGGGAAGTCTAAGGGTTCAAGAGTTCCTGGAAAAGGCTGCAGAGGGGCTAGTTGAAGGGGGAAAGAAAGAAATTTTCACACCAATGTACTTCTTTTTGGCTCGGAAACCAGATTCTTCCACTCACTAA 1023 0.4164 MNLASGVGGKIEKSQILSAVEKYEKYHVCYGGQEEERKANYTDMVNKYYDLSTSFYEFGWGQSFHFAHRWKGESLQESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGEALNRIAGVDRTCNFVKADFMKMPFTDNSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTEQFDPNNEEHQKIKAEIEIGDGLPDIRLTTKCAEALKQAGFEVIWEKDLAIDSPVPWYFPLDTTNFSLNTFRLTAVGRFFTRSLVKGLEFVGLAPKGSLRVQEFLEKAAEGLVEGGKKEIFTPMYFFLARKPDSSTH* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0123 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 336 IPR029063 -
Pvu11g0123 340 Pfam Sterol methyltransferase C-terminal 272 335 IPR013705 GO:0006694|GO:0008168
Pvu11g0123 340 CDD AdoMet_MTases 97 192 - -
Pvu11g0123 340 Gene3D Vaccinia Virus protein VP39 19 266 IPR029063 -
Pvu11g0123 340 Pfam Methyltransferase domain 99 196 IPR013216 GO:0008168
Pvu11g0123 340 PANTHER CYCLOARTENOL-C-24-METHYLTRANSFERASE 1 336 - -
Pvu11g0123 340 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
Pvu11g0123 340 PANTHER ZGC:194242 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0123 Pvu-Chr11 915192 918883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0123 83 251 Acyl Lipid Metabolism Gene Families AT1G48600 32.544 6.31e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0123 K00559 - gmx:100818061 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0123 11 915192 918883 Pvu5g0247 5 2137108 2142255 PCT