Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0237 ATGGAAGGAGAGGGAAAGGTATCAGCAGAAAATGAGCAACAAAGCAGGTTCAAAAGAATATGTGTTTTCTGTGGTAGTAGAGCTGGATACAAGTCTGCATTCAGTGATGCAGCTCTTGAGCTTGGCAAATTCATGGTTGAAAGGAGAATTGATCTGGTTTATGGAGGAGGAAGCTTAGGACTAATGGGTTTGATCTCTCAGACTGTGCTAAATGGAGGTTGCCATGTTGTTGGAGTGATTCCAGAAACTCTTTTGCCTCGTGAGGTGTCTGGAGAGACCTTTGGAGAAGTGAAAAGAGTTGCAGACATGCATGAAAGAAAATCAACCATGTTTGAACATGGAGGCTATGGAACCATGGAAGAGCTGCTAGAAGTCATAGCCTGGTCTCAACTAGGAATACATGACAAACCAGTGGGGTTGCTGAATGTGGAAGGATATTTCAATGGATTGTTGGAGGTATTTGATAAGGGAGTGGAAGATGGTTTCATAGACAAGTCTGCAAGGCATATTATGCTCATAGGAGACACACCAGAAGAACTCATAAACAAAATGGAGGAATATGTTGCAAATAAAGTTGGAAGAGTGGAGCAATTATGA 597 0.4204 MEGEGKVSAENEQQSRFKRICVFCGSRAGYKSAFSDAALELGKFMVERRIDLVYGGGSLGLMGLISQTVLNGGCHVVGVIPETLLPREVSGETFGEVKRVADMHERKSTMFEHGGYGTMEELLEVIAWSQLGIHDKPVGLLNVEGYFNGLLEVFDKGVEDGFIDKSARHIMLIGDTPEELINKMEEYVANKVGRVEQL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0237 198 Gene3D - 6 186 - -
Pvu5g0237 198 Pfam Possible lysine decarboxylase 62 184 IPR031100 -
Pvu5g0237 198 TIGRFAM TIGR00730: TIGR00730 family protein 18 187 IPR005269 GO:0009691|GO:0016787
Pvu5g0237 198 SUPERFAMILY MCP/YpsA-like 16 187 - -
Pvu5g0237 198 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED 9 190 - -
Pvu5g0237 198 PANTHER LOG FAMILY PROTEIN YJL055W 9 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0237 Pvu-Chr5 2008896 2010207 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0237 K22522 - gmx:100783827 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1838 1 44084869 44089144 Pvu5g0237 5 2008896 2010207 ECH
Pvu5g0237 5 2008896 2010207 Pvu5g0237 5 2008896 2010207 ECH