Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1838 ATGGAGACACGGTGCGAGATAACGCTTTCAAAGTTCAACAGGATTTGTGTGTTCTGTGGAAGTAGCCCCGGCAAGAAGAGTAGCTATCAAGATGCTGCCATTGAGCTCGGCAATGAACTGGTTTCAAGGAACATCGATCTGGTGTATGGAGGGGGAAGCATTGGTCTAATGGGTTTGGTTTCTCAAGCTGTTCATGATGGCGGTCGCCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACGGTGGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCCAAACATTCAGATGCCTTTATTGCCTTACCAGGAGGATACGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCCGTGGAAGAGGGATTTATCAGTCCAAATGCTCGTCACATAATTGTATCAGCACCAACAGCAAAGGAGTTGGTGAAGAAATTGGAGGATTACGTTCCCTGTCATGAGGGTGTTGCTTCCAAGTTGAGCTGGCAGATAGAACAGCAGCTTGCATACCCTCAAGATTATGACATGTCAAGGTAG 660 0.4636 METRCEITLSKFNRICVFCGSSPGKKSSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQIEQQLAYPQDYDMSR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1838 219 Gene3D - 4 189 - -
Pvu1g1838 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Pvu1g1838 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Pvu1g1838 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 219 - -
Pvu1g1838 219 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 219 - -
Pvu1g1838 219 TIGRFAM TIGR00730: TIGR00730 family protein 14 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1838 Pvu-Chr1 44084869 44089144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1838 K22522 - gmx:100810030 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1838 1 44084869 44089144 Pvu5g0237 5 2008896 2010207 ECH
Pvu1g1838 1 44084869 44089144 Pvu1g1838 1 44084869 44089144 ECH