Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1617 ATGTCGCTACACGGCAGCGACCGCCGTGATACGTCGAGCGCCGGCGGAAACGGCACCGTGGCGGCGGCGAGCCTGAGGCTGCGGCTGAACCCTAACAAGGAGCATAAACCAGATGGCTACGAGGACCTGCAGTTGGATTTCAGCCCTAACATCTTCAGCTCCTTGGAGAGGTACCTCCCTCCGAGCATGCTCAACGTGCCTCGTGACGATAAGGCCAAGTTCATGCGCGAGATTCTGCTCAAGTATCTACCCCTCGGGGAACGCAGCAGATCTCAAAAGCATAGAGAATACAGACAGAAGATAATAGAAAATTATCAGCCTCTTCATCGGGAGTTGTACTCTGTGAATCCTGCTACATTCTTTGTCCCTTCATTTCTGAGAGCAATTAATGATAATACTGAGCAAAGCTTTAGAAGTATAATGTCTGAACCCTCTCCAGGCATTTTTTTATTTGACATATTTCAGACCAACTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTACTTGATGACTTTGGACTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCGGAAGTTGGTGGGGCAACCCTGGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACCTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATACGATGTGAAAAACATGTAAATACTGGAAGTCGTCCAGAGGAGATCTTTGATTATTCTCATGTTCCTGGACAAGCTGTGCTTCATCGTGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCCGGTAATCGGGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTTAGGGAGATGAAACGGTATCAAAAAGATTTTTCCAGCTGGTGTGGCGAGTGCAGTCGTGAGAAAAAGGAAAGGCAACGCTCAACAATTGCTGCTACCAAATTGGAGTTGTTCAGGAGGGAAGGTGAATCCACTGCATAA 1125 0.4533 MSLHGSDRRDTSSAGGNGTVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVPRDDKAKFMREILLKYLPLGERSRSQKHREYRQKIIENYQPLHRELYSVNPATFFVPSFLRAINDNTEQSFRSIMSEPSPGIFLFDIFQTNFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGSRPEEIFDYSHVPGQAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1617 374 MobiDBLite consensus disorder prediction 1 40 - -
Pvu4g1617 374 MobiDBLite consensus disorder prediction 1 19 - -
Pvu4g1617 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 326 IPR005123 -
Pvu4g1617 374 Gene3D q2cbj1_9rhob like domain 148 326 - -
Pvu4g1617 374 SMART p4hc 146 325 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pvu4g1617 374 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 15 373 - -
Pvu4g1617 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1617 Pvu-Chr4 43416101 43422165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1617 - - gmx:100816390 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1617 4 43416101 43422165 Pvu2g3356 2 48452872 48456595 ECH
Pvu4g1617 4 43416101 43422165 Pvu4g1617 4 43416101 43422165 ECH
Pvu2g3356 2 48452872 48456595 Pvu4g1617 4 43416101 43422165 PCT