Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3356 ATGTTGCTTAACAATGATTTTATCGATCACAAAAAATCGTCAACAATCAAGAATGATGATAGTAATATCAAAGACAACACTACAATAGAAGACTCTAGCTCTAACAAAGTAAAAGGAAGGTTGATGCAAAATCCAAACAAGAATCACAAGTCAGAGTCATACGATGATTTGAAATTGGATTTCTCTGCTGAACTTTTTAGCTCATTGGAGAATTACCTTCCAAAAGACATACTCAACACCTCTCGTGACAACAAGGTTAAGTACATGTACACCATTTTGCACGATTACCTACCACCAGAAACACAATACAGGGTTGAACATTTTGAGAAATGGGTCAACACAACAAACTTTCAAGTTATACGTCCCACTACAATGAATAAATTTGGTGTTGTACTTGATGACTTTGGCTTTCAAACCATGTTTGACAAGCTTATGGAAGGTTTTATTTGTCCCTTATCAAAAGTCTTATTTGCAAAAGTTGGTGGCTCAACTTTGGATTTTCATCATGGATTTGTTGTTGAATATGGTATAGATAAAGATGTTGACTTGGGTTTCCATGTTGATGACTCAGAGGTAACCTTAAACGTTTGTTTGGGTAAGCAATTTTCTGGAGGTGAATTGTTTTTTCGAGGCATACGATGTGAAAAACACATGCATACAAAAAGTCATCCAGAGGAGAATTTTGACTATTTCCATATTCCTGGACAAGCTGTGCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCTACAACATGGGGTCATCGAGTCAATCTAATTTTGTGGTGCAAAAGGTAA 798 0.3659 MLLNNDFIDHKKSSTIKNDDSNIKDNTTIEDSSSNKVKGRLMQNPNKNHKSESYDDLKLDFSAELFSSLENYLPKDILNTSRDNKVKYMYTILHDYLPPETQYRVEHFEKWVNTTNFQVIRPTTMNKFGVVLDDFGFQTMFDKLMEGFICPLSKVLFAKVGGSTLDFHHGFVVEYGIDKDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHMHTKSHPEENFDYFHIPGQAVLHHGRHRHGARATTWGHRVNLILWCKR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3356 265 MobiDBLite consensus disorder prediction 14 53 - -
Pvu2g3356 265 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 265 IPR005123 -
Pvu2g3356 265 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 104 264 - -
Pvu2g3356 265 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 105 - -
Pvu2g3356 265 SMART p4hc 88 264 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pvu2g3356 265 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 23 105 - -
Pvu2g3356 265 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 104 264 - -
Pvu2g3356 265 MobiDBLite consensus disorder prediction 27 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3356 Pvu-Chr2 48452872 48456595 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3356 - - pvu:PHAVU_002G326100g 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1617 4 43416101 43422165 Pvu2g3356 2 48452872 48456595 ECH
Pvu2g3356 2 48452872 48456595 Pvu2g3356 2 48452872 48456595 ECH
Pvu2g3356 2 48452872 48456595 Pvu4g1617 4 43416101 43422165 PCT