Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1594 ATGATCACCTTAGTAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCAGTTAAGTGGTGGAAGATTTTCTCCCCTGACCAATGTTCAGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTTTCCTTCCACTTCATAGCATCCAACAACCCTTACAAGATGAACCTTAGGTTCCTAGCTGCTGACACACTTCAGAAGATCATACTACTAGTCCTTCTTGCAATCTGGAGCAACTTCACCAAAAAGGGGTGCTTGGAGTGGACCATAACCTTGTTCTCCCTCTCCACCCTCCCCAACACTTTGGTCATGGGCATCCCTTTGCTCAAAGGGATGTATGGGGAGTTCTCTGGGAGTCTCATGGTGCAAATTGTGGTCCTTCAGTGCATCATTTGGTACACCTTGATGCTGTTCATGTTTGAGTTCAGGGGTGCCAGAATGCTAATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTGGACTCTGATGTCATGTCATTGGATGGAAGACAACCACTTGAGACTGAAGCTGAGATCAAAGAAGATGGGAAACTCCATGTCACTGTGAGGAAATCCAATGCCTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTTTCTTCCACCACTCCACGCCCTTCTAACCTCACAAATGCAGAGATATACTCTTTGCAGTCTTCTAGGAACCCAACACCAAGAGGGTCTAGCTTCAACCACACAGACTTCTACTCAATGATGGCTGCTGGTGGCAGGAACTCCAACTTTGGAGCCTCGGATGTTTATGGCCTTTCAGCTTCAAGAGGGCCAACTCCAAGGCCTTCTAACTATGATGAAGATAGTGGGAAGCCAAAGTTTCATTACCATGCCGGTGGAACTGGACACTACCCTGCACCAAACCCTGGCATGTTCTCTCCCTCTAATGGCTCCAAAAGTGTTGCTGCTGCTAATGCTAATGCTAATGCTGCTAATGCCAAGAAGCCTAATGGGCAGGCTCAGCTGAAGCCTGAGGATGGGAATAGGGACCTTCACATGTTTGTTTGGAGTTCAAGCGCTTCACCTGTTTCTGATGTGTTTGGTGGCCATGAGTATGGAGGTCATGATCAGAAAGAAGTCAAATTGACTGTTTCTCCAGGAAAAGTGGAGAATCATAGAGACACTCAGGAGGACTACCTAGAGAAAGATGAGTTCAGTTTTGGGAATAGAGGAATGGAGAGGGAGATGAATCAGCATGAGGGTGAGAAAGTTGGAGATGGGAAGCCAAAAACCATGCCTCCTGCAAGTGTGATGACAAGACTTATATTGATTATGGTGTGGAGGAAACTCATCAGAAACCCCAACACATACTCTAGTCTAATTGGCCTCACTTGGTCTCTTGTTTCATTCAGGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATACTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCCTACACGTTGCCATTGTTCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCCAAGGAATATAATGTACATCCAGATATTCTGAGCACAGCTGTTATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTAGTGTACTACATTTTGATGGGGTTGTGA 1827 0.4663 MITLVDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIILLVLLAIWSNFTKKGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDSGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYGGHDQKEVKLTVSPGKVENHRDTQEDYLEKDEFSFGNRGMEREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1594 608 TIGRFAM 2a69: auxin efflux carrier 1 608 IPR014024 -
Pvu4g1594 608 MobiDBLite consensus disorder prediction 213 235 - -
Pvu4g1594 608 Pfam Membrane transport protein 9 603 IPR004776 GO:0016021|GO:0055085
Pvu4g1594 608 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 608 - -
Pvu4g1594 608 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1594 Pvu-Chr4 43169086 43172845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1594 1 599 Organic Solute Cotransporters AT1G73590 74.010 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1594 K13947 - gmx:100499637 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3399 2 48831829 48835217 Pvu4g1594 4 43169086 43172845 PCT