Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3399 ATGATCACTTTAGCCGACTTTTACCACGTCATGACCGCAATGCTGCCACTCTATGTGGCCATGTTACTCGCTTACGCGTCGGTCAAATGGTGGAAAATCTTCTCCCCGGACCAATGCTCCGGCATAAACCGCTTCGTCGCTCTGTTCGCAGTCCCTCTGCTCTCCTTCCACTTCATCGCCTCCAACAACCCCTACCAGATGAACTTCCGGTTCATCGCGGCGGACACGCTGCAGAAGACGATCGTGTTGGCGGTGCTGACGATCTGGAGCAACGTCAGCAAGAGGGGGTGTTTGGAATGGACCATAACTCTGTTCTCCATCTCCACCCTCCCCAACACGCTGGTGATGGGCATTCCGTTGCTGAAGGGGATGTACGGGGAATTCTCCGGGAGTTTGATGGTCCAAATAGTGGTCCTCCAGTGCATCATCTGGTACACCTTGATGCTGTTCATGTTCGAGTACAGAGGCGCCAGAATGTTGATATCAGAGCAGTTTCCAGACAGTGGCGCCGCCATTGTCGCCATCCACGTGGACTCCGATGTGATGTCGCTTGATGGACGACAGACCTTGGAAACGCAAGCCCAGATCATGGAGGACGGCAAGCTCCACGTCACCGTCAGAAAGTCCAACGCTTCCAGATCCGACATCTTCTCCAGAAGGTCCCATGGCTTCTCTTCCACCACCCCTCGCCCTTCCAACCTCACCAATGCAGAGATTTACTCTCTCCAATCCTCCACCAACCCCACTCCCAGAGCCTCCAGCTTCAACCACTCCGATTTCTACTCCATGATGGCCCCTCCTCGTACCTCCAACTTCGCCACCAACGACGGTTATGCCTTCTCTGCTTCCAGAGGACCAACTCCCAGACCTTCCAACTACGACGAAGATGCTTCCGCAGCTGCTAATGCTAATGCCAACAACAACGACAAACCCAGGCACCATTACCCTGCTCCTAACCCTGACATCTTCTCCCCCGCCGCGTATAAAAATGGCCCCAAGAAGCCCAATGGGCATGCCAGTGCCCCCTCCAAAGCAGAGGATCCAAACAGGGACCTTCATATGGTCGTTTGGAGTTCAAGTGCTTCCCCTGTTTCAGATGTGTTTGGTGGACATGAACACGATCATAGAGAAGTGAAGATAGCTGTGTCTCCCAAAAAAGGGGAGGGTAACAGAGAGAGTGAAGAGGAGTACCTTGAGAAGGAGGGTTTTAGTTTTGGAAAGAGGGAGATTGAGAATGAGCATGAAGTTGAGAAAGCTGGGAACAGAAATCCAAAAACTATGCCTCCAACGAGTGTGATGACAAGACTTATTTTGATCATGGTGTGGAGGAAACTTATCAGAAACCCCAACACATATTCCAGCCTAATTGGCCTAACTTGGTCACTTATTTCCTTCAGGTGGAACGTGGAAATGCCAGCCATAATTGCCAAGTCTATTTCCATATTGTCAGATGCAGGGCTTGGGATGGCCATGTTTAGTCTTGGTCTGTTCATGGCTTTGCAACCAAGGATCATAGCATGTGGAAATTCCACAGCAGCTTTTTCTATGGCCGTGAGATTCCTTACAGGTCCAGCTGTCATGGCCGTTGCTTCCATTGTTGTTGGACTCAAAGGTGTTCTCTTACACGTTGCCATTGTTCAGGCAGCTCTTCCTCAGGGAATTGTCCCATTTGTGTTTGCAAAGGAATACAATGTGCACCCTGATATTCTGAGCACTGGTGTTATTTTTGGGATGTTGATTGCATTGCCCATTACTCTGGTGTACTACATCTTGCTGGGGTTATTATGA 1788 0.5045 MITLADFYHVMTAMLPLYVAMLLAYASVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYQMNFRFIAADTLQKTIVLAVLTIWSNVSKRGCLEWTITLFSISTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLISEQFPDSGAAIVAIHVDSDVMSLDGRQTLETQAQIMEDGKLHVTVRKSNASRSDIFSRRSHGFSSTTPRPSNLTNAEIYSLQSSTNPTPRASSFNHSDFYSMMAPPRTSNFATNDGYAFSASRGPTPRPSNYDEDASAAANANANNNDKPRHHYPAPNPDIFSPAAYKNGPKKPNGHASAPSKAEDPNRDLHMVVWSSSASPVSDVFGGHEHDHREVKIAVSPKKGEGNRESEEEYLEKEGFSFGKREIENEHEVEKAGNRNPKTMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSTAAFSMAVRFLTGPAVMAVASIVVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGLL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3399 595 MobiDBLite consensus disorder prediction 275 348 - -
Pvu2g3399 595 Pfam Membrane transport protein 9 589 IPR004776 GO:0016021|GO:0055085
Pvu2g3399 595 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 594 - -
Pvu2g3399 595 TIGRFAM 2a69: auxin efflux carrier 1 594 IPR014024 -
Pvu2g3399 595 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3399 Pvu-Chr2 48831829 48835217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3399 1 585 Organic Solute Cotransporters AT1G73590 69.243 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3399 K13947 - gmx:100786572 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3399 2 48831829 48835217 Pvu2g3399 2 48831829 48835217 ECH
Pvu2g3399 2 48831829 48835217 Pvu4g1594 4 43169086 43172845 PCT