Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1573 ATGCGCTTTATATATAAACAACCTCTTTGGCTGTCCCATGCCATAATTCATGTCTGTTGCTTCTTTCTTCTCATCTTCTTCTTCTTCTTCTACCCTTTAATATTACCATTGTTCCACTTTGCAAACACTACTACTCCAACAACAAGAACAAGCAAGACCAGTGTTATGGGTCTCTTCCTTTCTCGGAATTTGGCTTGCAAATTCATATACCCTTTTCTTTTCTCCAAGAGGGTTTCCAAGGATTTGTTTCCCAAGCAGTTGGAGAACATGATGTCTCTGGTGTCTCCTCGTACTGGCAGGCATTTGCAGCGCTATGACCAAGGATGTCGCCAAGTTGTGGGGTGCATTCCTTATAGATACAAGAACAATGGAACAAAAGATAAGGAGTTAGAGGTTCTTGTGATTAGTGCTCAAAAGGGTCATGGAATGCAGTTCCCAAAGGGAGGTTGGGAAATTGATGAATCCATGGAACAAGCTGCTCTAAGGGAGACTGTAGAAGAAGCTGGGGTTATTGGCAGTGTTGAGAGTAATTTGGGTAAATGGTATTACAAGAGCAAACGCCAACCCATAATGCATGAAGGTTACATGTTCCCTTTGCTAGTTAAGAAGGAGTTGGATAACTGGCCAGAGATGAACACAAGAAAACGCAGATGGATGACTGTGACTGAGGCAAAAGAAATATGCCCTTATACTTGGATGAAGGAAGCTTTGGATGTATTGGTCATGAGACAAAATCAGCTGCACTCCAAAAAGGATGTGGATATGTGTAGATTGTAA 777 0.4183 MRFIYKQPLWLSHAIIHVCCFFLLIFFFFFYPLILPLFHFANTTTPTTRTSKTSVMGLFLSRNLACKFIYPFLFSKRVSKDLFPKQLENMMSLVSPRTGRHLQRYDQGCRQVVGCIPYRYKNNGTKDKELEVLVISAQKGHGMQFPKGGWEIDESMEQAALRETVEEAGVIGSVESNLGKWYYKSKRQPIMHEGYMFPLLVKKELDNWPEMNTRKRRWMTVTEAKEICPYTWMKEALDVLVMRQNQLHSKKDVDMCRL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1573 258 CDD Nudix_Hydrolase_9 111 234 - -
Pvu4g1573 258 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 74 257 - -
Pvu4g1573 258 SUPERFAMILY Nudix 110 240 IPR015797 -
Pvu4g1573 258 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 96 243 - -
Pvu4g1573 258 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 74 257 - -
Pvu4g1573 258 ProSitePatterns Nudix box signature. 148 169 IPR020084 GO:0016787
Pvu4g1573 258 ProSiteProfiles Nudix hydrolase domain profile. 108 241 IPR000086 -
Pvu4g1573 258 Pfam NUDIX domain 129 234 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1573 Pvu-Chr4 42958062 42960284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1573 K07766 - gmx:100527127 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3412 2 48897009 48898331 Pvu4g1573 4 42958062 42960284 PCT