Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3412 ATGATTTTGGCTTCTTTGTTTGTCATGGGTCTCTTCTTTTCAAGGAATCTACCATTGCTCTTTCTTTATTCCAAGAATGCTTCTGCACATTTCATTCCCGACCACATGATCTGCCTCGTCTCCCGCACCGGCAGGGAGCTGCAGCGCTACCACCTTGGCCGCCGCCAAGTTGTCGGATGCATTCCGTACAGATACACGAGAAAGGGAAGCCAAGATAATGAATTGGAGGTTCTGGTGATCAGTGCGCAGAAGGGCAATGGAATGCAGTTCCCCAAGGGAGGTTGGGAGAACGACGAATCCATGGAACAGGCTGCTGTAAGGGAGAGCATAGAGGAAGCTGGAGTCGTTGGAAACGTGGAAAATAAATTGGGTAAATGGTTTTACAAAAGCAAAAGCGAAGACACCTTACGTGAGGGATATATGTTTCCTTTGCTTGTGCAGAAACAATTAGAGAATTGGCCAGAGAAGAACTTTCGAAAACGAACATGGATGACAGTTGCTGAAGCAAAACAAGTGTGTCCACATCCTTGGATGAAGGAGGCTTTGGATGTGTTGGTGAGTAGACAACCCCAATTGTGGAGTTTGCAGAGAGACACAACAGAAGGAATAACAATCATCGAGAGATTGATGGTAGATACTGAAAGAAATTTCTAG 654 0.4572 MILASLFVMGLFFSRNLPLLFLYSKNASAHFIPDHMICLVSRTGRELQRYHLGRRQVVGCIPYRYTRKGSQDNELEVLVISAQKGNGMQFPKGGWENDESMEQAAVRESIEEAGVVGNVENKLGKWFYKSKSEDTLREGYMFPLLVQKQLENWPEKNFRKRTWMTVAEAKQVCPHPWMKEALDVLVSRQPQLWSLQRDTTEGITIIERLMVDTERNF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3412 217 CDD Nudix_Hydrolase_9 56 179 - -
Pvu2g3412 217 ProSitePatterns Nudix box signature. 93 114 IPR020084 GO:0016787
Pvu2g3412 217 ProSiteProfiles Nudix hydrolase domain profile. 53 186 IPR000086 -
Pvu2g3412 217 SUPERFAMILY Nudix 40 191 IPR015797 -
Pvu2g3412 217 Pfam NUDIX domain 72 177 IPR000086 -
Pvu2g3412 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 40 188 - -
Pvu2g3412 217 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 24 198 - -
Pvu2g3412 217 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 24 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3412 Pvu-Chr2 48897009 48898331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3412 K07766 - gmx:100800531 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3412 2 48897009 48898331 Pvu2g3412 2 48897009 48898331 ECH
Pvu2g3412 2 48897009 48898331 Pvu4g1573 4 42958062 42960284 PCT